Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC111191900 |
| gene name | eif4g3 |
| gene type | coding |
| species | mexican tetra (Astyanax mexicanus) |
| category of species | ornamental fish |
| Item | Value |
|---|---|
| chromosome id | NC_035899.1 |
| NCBI id | CM008302.1 |
| chromosome length | 74127438 |
| location | 40307931 ~ 40309488 (-) |
| genome version | Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome |
| symbol | description |
|---|---|
| eif4g3 | Enables RNA binding activity. Predicted to be involved in regulation of translational initiation. Predicted to act upstream of or within positive regulation of cellular protein metabolic process; positive regulation of meiosis I; and spermatogenesis. Predicted to be located in cytosol. Predicted to be part of eukaryotic translation initiation factor 4F complex. |
| description |
|---|
| PREDICTED: eukaryotic translation initiation factor 4 gamma 3 isoform X2 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_022668022.1 | True | 1261 | mRNA | 0.40 | 3 | 40307931 | 40309488 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| ptprk | ptprk,LOC106607755,LOC106571353 | coding | downstream | 195308 | 40020492 ~ 40112623 (-) |
| themis | themis | coding | downstream | 290837 | 39994584 ~ 40017094 (-) |
| LOC103039380 | LOC103039380,LOC108432811,LOC108261192 | coding | downstream | 330235 | 39975740 ~ 39977696 (-) |
| LOC111191895 | NA | coding | downstream | 337208 | 39965925 ~ 39970723 (-) |
| LOC111196312 | LOC103039380 | coding | downstream | 346453 | 39960453 ~ 39961478 (-) |
| arfgef1 | arfgef1,LOC107595140,LOC107686689 | coding | upstream | 10441 | 40319929 ~ 40358619 (-) |
| cpa6 | cpa6,LOC107695399,LOC107686690 | coding | upstream | 119497 | 40428985 ~ 40482543 (-) |
| LOC103046753 | chrm5 | coding | upstream | 942072 | 41251560 ~ 41263819 (-) |
| ryr3 | ryr3 | coding | upstream | 970379 | 41279867 ~ 41391804 (-) |
| LOC103044553 | grem1 | coding | upstream | 1118695 | 41428183 ~ 41431907 (-) |
| G24997 | NA | non-coding | downstream | 459722 | 39845373 ~ 39848209 (-) |
| G24992 | NA | non-coding | downstream | 481950 | 39819276 ~ 39825981 (-) |
| G24964 | NA | non-coding | downstream | 575452 | 39724455 ~ 39732479 (-) |
| LOC111196215 | NA | non-coding | downstream | 783657 | 39514469 ~ 39524274 (-) |
| G24911 | NA | non-coding | downstream | 808465 | 39499043 ~ 39499466 (-) |
| G25128 | NA | non-coding | upstream | 74113 | 40383601 ~ 40421173 (-) |
| G25174 | NA | non-coding | upstream | 416311 | 40725799 ~ 40726362 (-) |
| G25173 | NA | non-coding | upstream | 416997 | 40726485 ~ 40728663 (-) |
| G25258 | NA | non-coding | upstream | 844779 | 41154267 ~ 41154801 (-) |
| G25255 | NA | non-coding | upstream | 912631 | 41222119 ~ 41223487 (-) |
| LOC111196341 | NA | other | downstream | 77063 | 40175262 ~ 40230868 (-) |
| G24903 | NA | other | downstream | 849742 | 39455236 ~ 39458189 (-) |
| LOC103043888 | LOC108432835 | other | downstream | 961015 | 39273635 ~ 39346916 (-) |
| batf | batf,LOC107697118 | other | downstream | 983229 | 39309726 ~ 39324702 (-) |
| smim8 | smim8 | other | downstream | 1380938 | 38925623 ~ 38926993 (-) |
| G25265 | slco5a1 | other | upstream | 904933 | 41214421 ~ 41218829 (-) |
| arhgap11a | NA | other | upstream | 1126553 | 41436041 ~ 41442494 (-) |
| LOC111196508 | NA | other | upstream | 1546607 | 41856095 ~ 41865844 (-) |
| LOC111196586 | LOC108262118 | other | upstream | 1559536 | 41869024 ~ 41880424 (-) |
| G25678 | NA | other | upstream | 2408178 | 42717666 ~ 42718389 (-) |
