LOC103032605


Basic Information

Item Value
gene id LOC103032605
gene name NA
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035899.1
NCBI id CM008302.1
chromosome length 74127438
location 47918346 ~ 47926402 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_022668066.1
CTGTGATCTGTGCTGAGAGAAATGAACGATTCAAAAAGTGAGATTTGGAATCAGCTGCGGCTGGAGGACACGCTGTGCGATGTGGTCCTCAAAGTGGACGGGGTTCAGTTCAGAGCCCATAAGATCATCCTGTGTGCGTGCAGCGAGTACTTCAGAGTTCTGATGACCAGCAGTCACTGGACGTGCTCTGAGCAGAGGGAGTACACCATTCTAGATGTGTCTCCAGATATAATGGAGCTCATCATAGAATACGCCTACTGCCACAAGACCGACATCACATCTAAGAACGTTGTGGATCTTCTGATTGCTGCTGACAAACTGGACATCCAGGGCATCAAGAACCTCTGCTGTGGCTTCCTGCAGAAGCAGCTCTGCCCTGAAAACTGCATCAGCATCTGGAGGTTCACTGAGTTGTACAGCTGTCATGACCTGTATCAGAAGGCATACAGCTACATGCTGCAGCACTTTGAGGAGGTGATATTGGAGCCGGTGGAGAACTTCTTGGAGCTCACCCTGTCGCAGCTGAGTGACATCCTCGATAACAGTAAGCTGAGTGTGAAGCAGGAGGAAACGGTATTTGAAGCAGTGATGATGTGGATTGACCACGCCCCTCAGCTCCGCTCAAAGTACATCCCAGTTTTACTGCAGAAGGTGCGGGTGGGCCTAATGAATCCTGATTACGTCCTGGAATTTGTGATGAAAGACCCACTGGTCTGCTCCAACCAGGAATGTCAGCCTATCATCACTCGTGTCCTGGGATCTTTGCTCCGCATCTGCAGGAATGGACCGACCGACAGCTTCTCCCAAGATCCTGTAAGCCGGCCTCGCATACCTGGCTCCTGCCTGTTCGCCCTAAGCGGCTGGAACGGTGGCTTCATCAATGCTGTCGAGTTCTATAACTCAAATGTAGACTGCTGGACACCGCTTTCTTGGGTGGATATTGATGAAACCCCAAGAGGTTATTACGGAACAGCCGTTCTAGACGGGCATCTTTATGTGTTGGGGGGTTTCAACAGTGGAGTGTACTTCAACACTGTAAAGAAATTGAACCCCCTTACCCAAACCTGGCACCAAGTGGGGCACATGCAGCTGCAAAGATGTTACGTCACTGTCGCCGTGCTCGATGGCCTCATCTATGCCATGGGTGGCCACAGTGGCCGGGAGAGGTTGAGCTCAGTGGAGCGCTACGATCCCAAGACCAACCAGTGGAGCCTCATCACATCCATGCAGTTGGTCAGAAGCGACGCCAGTGCGACCGCCCTCAACGGGAAGATCTACATCTGCGGAGGCTACAACGGCCGGCAGTGTCTCTCCAGGGCTGAGTGCTTTGACCCGCTGACTGATAATTGGAGTTCTATTGCCCCTATGCAGTCGAGCAGGAGTGGACTGGGTGTTGCTGCTTTTAACGAGCTGGTGTTTGCGGTTGGAGGTTACGATGGATTTGGGCAACTAAATAGTGTTGAATTCTATAACCCCAAATTCGACCAATGGACAACAGTCACCCCAATGTTTGAGCGTCGCTGCAATTTTGGAATTGAGGTGTTGAACGACCGGTTGTTTGTGGTTGGTGGCCATAATGGTGTTGGTGCCATCGCCAGTACAGAATGTTATGATGCCTTAAGGAATGAGTGgtatTGTGTCCAGGATATGGTGCTGGGCCGCAGTGCTCTCAAATGCTCTGTTTTGAGAGGAATGCAGAACATTGCAGAATATTCTGTACAGCAGGACGTTTGAACAAGACAGATATCGTAACACATaccatacaaataaatacaaaaaaagacaaaa

Function

GO: NA

KEGG:

id description
K10448 KLHL10; kelch-like protein 10

RNA

RNA id representative length rna type GC content exon number start site end site
XM_022668066.1 True 1788 mRNA 0.50 8 47918346 47926402

Neighbor

gene id symbol gene type direction distance location
man1a1 man1a1,LOC107727625 coding upstream 327930 47393247 ~ 47590416 (+)
tbc1d32 tbc1d32,LOC107602184,LOC107675228,LOC107727650 coding upstream 718138 47139549 ~ 47200208 (+)
LOC103044458 LOC108424466 coding upstream 799332 47115452 ~ 47119014 (+)
prpf39 prpf39 coding upstream 1392520 46519113 ~ 46525826 (+)
otx2 LOC108410484 coding upstream 1457532 46456013 ~ 46460814 (+)
fam184a fam184a,LOC107678849,LOC107697135,LOC106607780 coding downstream 14035 47940437 ~ 48196539 (+)
mcm9 mcm9,LOC107549683 coding downstream 274534 48200936 ~ 48219344 (+)
cep85l cep85l,LOC107727619,LOC107603087,LOC107678822 coding downstream 305868 48232270 ~ 48311540 (+)
amd1 amd1 coding downstream 615133 48541535 ~ 48565601 (+)
LOC111194359 LOC108441310,LOC108412179,LOC108441308 coding downstream 694328 48620730 ~ 48621912 (+)
G26872 NA non-coding upstream 165480 47752634 ~ 47752866 (+)
G26867 NA non-coding upstream 220766 47697342 ~ 47697580 (+)
G26864 NA non-coding upstream 236105 47681924 ~ 47682241 (+)
G26862 NA non-coding upstream 236634 47681193 ~ 47681712 (+)
G26861 NA non-coding upstream 237266 47679002 ~ 47681080 (+)
G26910 NA non-coding downstream 285735 48212137 ~ 48212982 (+)
G26982 NA non-coding downstream 492430 48418832 ~ 48450456 (+)
G26993 NA non-coding downstream 625831 48552233 ~ 48552667 (+)
G26994 NA non-coding downstream 626447 48552849 ~ 48553157 (+)
G26996 NA non-coding downstream 636202 48562604 ~ 48567294 (+)
fau fau,LOC108411505,LOC107704371 other upstream 1368793 46528368 ~ 46549553 (+)
LOC103033920 LOC108416105 other upstream 4424030 43490323 ~ 43494316 (+)
G25880 NA other upstream 4493440 43424392 ~ 43424906 (+)
G25879 NA other upstream 4496300 43421771 ~ 43422046 (+)
rps29 NA other upstream 4554902 43360469 ~ 43363444 (+)
G26915 NA other downstream 351865 48278267 ~ 48315894 (+)
G26995 NA other downstream 629395 48555797 ~ 48641905 (+)
LOC103035773 NA other downstream 652401 48578803 ~ 48618075 (+)
G27075 NA other downstream 814812 48741214 ~ 48742439 (+)
G27238 LOC107747660 other downstream 1521443 49447845 ~ 49448221 (+)

Expression


Co-expression Network