G60280


Basic Information

Item Value
gene id G60280
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000009
NCBI id null
chromosome length 16003125
location 15677482 ~ 15694591 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU68597
AGAAATCAGCCAGCAAGTATCGGATAATTTCCACTGAATGATTCCTAAACCCCAGACAAGCAGGCCTGATAAATCTCAGTAAAATCACAAAAGATAAAACGATGATCTTCTGTGGAAGTTCTGCAAAAGCTTCAGCAATTGCCTCAGCCACATCATCAGGAAGCTGACCAAAGAGAGTGCCCAGAGACATGATGATGACACCATGCTCACCAGAGCTCTGCACAAAGTCCTCCAGGTCTTGTGGAAGAGGCATTGATGGCTTGCACTGAAAACCTCCAATGTAGACAATGTTCGGCATAGTGGGACGTGGAAATTCAAAAATAAAATCAGCTCTATGGAGCCACAGATCAGCACCCTGAAGTAAAGATAAGTAGGATGTTCCTGGGCCAATGAAACGTTCACAAAGTGCATTATAAGTTGGAGTAATCATGATAGCTAGCTTTATTTCTGGTATGATGTACATCACAACATTCTTCACTCTTTCCAAGAAACTCATGCGGTCTGATAACTCCAGCATTGAAGCAGGAATATAAGAAAGTGGTGAAGGAGCTATTACAAAATGAGCCTCACTGTAAACTGTCCAACGGACATTGTAGACAATGGGCAGTTTGAGATAATGACCCAATAGGACACCTCCAAACATGGCTGGATCTGTTAGAATCAAATCATATTTGGAATCTTTTAAGGACCGCATTAGCTGCTGGTCTTCAAACATGTTGATTATAATCTTGTTTTCTACTTCAAGCATCCCTAAGAAACTTTTCCACATTATTAAGTCCAGCTTCAGACGAGCCCAGATCGAACCCTCCCTCATAATTCCCATTAGTCTGGATGCAAATGTCTCGAGTAATTCTTCACTAAATCCTCCTTCAGACTTGAGATTGATTGATGTGTAGTGAGGTGAGAATTCTTTGATGTACCAGCTGTCTGCTATCCGAATGACTGTAACTTTGTGTCCTTTGGCATGAAGTGCTTCAACCAAGATGTTCATGTTGATCCAGTGACTGCCACCCACGGGAAAGACGAGAACCTTCCCGCTCCGAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU68597 True 1044 lncRNA 0.42 2 15677482 15694591

Neighbor

gene id symbol gene type direction distance location
CI01000009_15667251_15668333 NA coding upstream 8032 15667251 ~ 15669450 (+)
CI01000009_15637754_15643935 NA coding upstream 33547 15637650 ~ 15643935 (+)
CI01000009_15625341_15626360 GPBAR1 coding upstream 51079 15625159 ~ 15626403 (+)
CI01000009_15610515_15613753 NA coding upstream 63729 15610032 ~ 15613753 (+)
CI01000009_15415868_15427139 NA coding upstream 250284 15413174 ~ 15427198 (+)
CI01000009_15708273_15712002 METTL5 coding downstream 11869 15706460 ~ 15712005 (+)
CI01000009_15738136_15745816 CCDC173 coding downstream 43481 15738072 ~ 15745866 (+)
CI01000009_15770057_15782295 FASTKD1 coding downstream 75466 15770057 ~ 15783049 (+)
CI01000009_15872202_15973125 LRP2, LRP2A coding downstream 177611 15872202 ~ 15973231 (+)
CI01000009_15992272_16002225 ABCB11, ABCB11A coding downstream 297681 15992272 ~ 16002225 (+)
G60213 NA non-coding upstream 14787 15662473 ~ 15662695 (+)
G60222 NA non-coding upstream 120581 15556519 ~ 15556901 (+)
G60221 NA non-coding upstream 121649 15555606 ~ 15555833 (+)
G60220 NA non-coding upstream 122071 15555133 ~ 15555411 (+)
G60219 NA non-coding upstream 122786 15554354 ~ 15554696 (+)
G60286 NA non-coding downstream 3188 15697779 ~ 15698147 (+)
G60293 NA non-coding downstream 53929 15748520 ~ 15749113 (+)
G60303 NA non-coding downstream 105090 15799681 ~ 15801256 (+)
G60028 NA other upstream 301313 15352047 ~ 15376169 (+)
CI01000009_14925314_14952223 NA other upstream 721687 14924621 ~ 14952571 (+)
CI01000009_14857765_14859526 NA other upstream 818838 14857713 ~ 14859636 (+)
G58711 NA other upstream 903709 14766659 ~ 14773773 (+)
G58649 NA other upstream 1025460 14649724 ~ 14652022 (+)

Expression


Co-expression Network