lama4


Basic Information

Item Value
gene id lama4
gene name NA
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035899.1
NCBI id CM008302.1
chromosome length 74127438
location 38526578 ~ 38577159 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_022678233.1
gagagagagggggggggagaGGACAAgtatagagagagtgtgtgtgtataaacgaCGGGATCAGACGGGTAACGGAgcgagacacacacactcaggagcTGAAGCAGTAGAGAGGGAAATGGCGTGTCTAGCCACTCTCTCACTGTGTTTACTGACCACTCTCTCTGGACTAACTCTGACCAGCGCTGAGCAGAACGTCTTTACAGTATGTGCGCGAGGTTTCTTCATGAGTGAACAGCTCACCTGTCTGCCCTGTAACTGTAAAGGCCACGCCCAAACCTGTGAGGACATCACTGGAATCTGCATCgactGTCAGGACCACAGTGTGGGAAATTTCTGTGAGGACTGTGAGGACGGATATGTTTTGGAGGTTTTCCCAGATGGCCGTCATGAGTGCCGCCCGTGTGCCTGCCCCATCTCTCTGGAGTCCAACAActTTGCTGCTTACTGTGATAAGAAGGGTGTGGTCCTGCGGTGTGTGTGCCAGGAGGGCTATGCCGGACACTACTGTGAGAGGTGTGCTCCAGGTTACTATGGAAACCCCATGCGCGTGGGCAGCTCCTGTAAGAAGTGCGACTGTAACGGGAACACAGACCCCAATCTGATCTTTAATGAGTGCCATAATGTGACAGGACAGTGCCTCCACTGCTGGGACAACACGGCTGGGCACAACTGCGAGAGATGTGCCCCCGGTTATTATGGCGACGCCATCGGTGCCAAAGATTGCCGGGAGTGCCAGTGTAACAAGTGTGGAACATCGTCCTGTGATGATCGAACAGGAGTGTGTCACTGCAAACCGGGTGTCACAGGACGACTGTGTGACCAGTGTGAGGAGGGTTATTCAGGATTCAGCAGTTGTCAGGGTTGCCGTCGTTGTGAGTGTGCTCCCGCTGGATTGAGGGCCACCTGCCACCCCCTCACGCATACCTGCCAGTGCCAACCAGGGGCCGGAGGCCGGTACTGCGAGCGCTGTTTGCCCGGCCACTGGGACTATACTCCCAACGGCTGCAAGAAGTGTGACTGTCCTGAGGGAAGCTGTGACATGCACACAGGAGAGTGTTTACCAGAAACCTCTCAGGTCAGCGAGTGCAACACCGAATGTGATGAATGTATCTGGCATCTGATTGGTGACGTCCGGCAGTCCAACAAAACTGTGGATCAGTTGAGGAACACCGTACTGAACATCTCAACTGGAGCTGCGGCAAATGACCGCATCAAGTACTACAACTACACTGCCCTCAGACTACAGgcTCAGTTTGTAGGATGGAAGAATAAATCCACAGTGTTGAGGAGGCAGACGGGGCAGCTGGAAGAATCAGCGGACACACTGCTAACAGACATGGAGCTACTTAAACAACAGGAGGAGGATGTGGCCTCTCTGGGGAGACGAGCGGATGAGGAAACGCTGCAAAGCTCCACGCTAGCTGAGACGCTAATGGCTAATCTGACTGCTGTGAATGTGCTCATAGAAGGTACTGCAGCCAAAACAATACAATTACTCATTACACATTTGTACATAACATTTTGCACTGTATACAGGAGCGGATTTGGAAGTTCTGGGGCCCCAAGCAACAATTTTTTCAGAGGGCTTTTATCAAATGGATTCTTTTGTATAGAAAAATGCAATATTGACAACCTAGCTGTCTCAGGTACCTCATCCtcgtcagatttttttttgctgctgcgaaaaaattggtttggtttggtttgcttTGTCAAGCTTTCTGCGCTGGACTTCCGTtccttagttttttttctttttatgtgtgtgtgtgtgtgtgtgtgtttgtgtatgtgtgtgtgtgcagtcttTCGGCAGGTGCGGCAGATGGAGAAGCGTGTAGTGGGGACTGAAGGTCGTGTTCCTGCAGTGAGAGAACTGATGAACCGCTTCAGCTCCAAAATCTCCAACGCTCAGCTCCTGATCAGCAAAGCAGAAGATACCCTGCAGAACagctacaccacacactccaccaacCAGCTCAGACTGCAGCGCCTACAGTTTCAGCAGCAGCGTCTGTTGGAAAATTATGGGGCTGTCAATCAAACCATGAGGACAGCTAAAGAAGTCTATGATGAAGCAGATGCTGGAGTGGAGGAGCTGGACATCATGGTAACAaacatCACAGCGTACCATGCGGAGGTGGACGGTGCCCAGGCATCTCTACAGAACAAGATTGATCAGCTCTCTGAAGTTGACTATGAGTTGCTGGAGAGAGCAACTGATCACGCAGAAGAACTAGAGAGACACGCAGACGAGCTCAAGCATAATCTGAAGGGAAGTGATGCGAACGGCTTTGTGCAGAAAGCCCTGGATGCTTCCAATGTGTATGACAACATCGTCAAATACATAAACGACGCCAACATCACCAGTCTGACCACCCTCAACCAATCACAACGGGCTGAAGATGCCATCACCGGCATCAAGTCTCAGCTACATTTCCTCAAAAATCAGAGTGACAACATGTTCAAGAGATCTGTTACACTGCACTCGGAACAACAGGAGATGGAGTCAACCGTTGCTGACACTTTAAACTACATAGAGGAGACTAAAGACATGAGGCAATCATCCAGCAATAAACTGGAAGCTATTGttgaagacatcaaaacaatCCAGGAAGccCGTCAGCCACTGCAGCTGCAGGTGACTCTGGAGGCGACGGAGGTTTGTCTGAATCGGTCAACCGAAGTGCTGGACACAGTGACCCCAATCAAAGAGAGAGTGGAGGAGTGGAACAGGAACATGAGGAACAACCAGTACTCTACACACGCTTACGAACAGGCTGTTGATTCTGCACAGGATACAGTGGCGGACCTGTCTGAGATTGTGCCGACGTTGTTGACTAAGCTGCGATCCGTGGAGGAGGCGAAGCCTATAAACAACGTCACGACCAACATCATGAGAATCCGAGAGCTGATAGCACAGGCTCGTAGTGTCGCTCGAAAGGTCCAGGTGTCAATGAAGTTTAATGGTCAGTCTGCGGTCGAAGTCCAGCCCCATTCCAATCTGGACGAGCTGAAGGCCGTGACCTCTATTAGCCTGTATGTTCGAGTCGATCCGGACAAGGACCCCATTGAGGATCGATTCCTGCTCTACCTTGGAGACAAGAATGGCGGTAAGGACTACATGGGCCTGGCGATAAAGAATGATAACCTGGTGTTTGTGTATAATCTTGGAGGAGAGGATGTGGAGATTTCTTTGACCTCCAAACCTGTGAGCTCCTGGCCTCCAGTCTTTAACCTTGTTAGAGTAGAGAGGCTGGGCCGTCATGGTAAAGTGTTCCTGACCGTGCCCAGTCAAGAGACCACAGCGGAACAGAAGTTCATTCAGAAAGGTGAAGCTGATGGAACAGATTCTCTCTTCCACCTGGACCCCAAAAACACTGTCTTCATCGTGGGGGGAGTTCCTCCTGACATAAAGCTGCCTCCTGCTCTGAGTCTGGCTCCATTTGTTGGCTGCATTGAACTGGCCACTCTCAATAATGACGTCATCAGCCTCTACAACTTCAAAAAGCTGCACATGATGAACGTCGTCACATCTGTGCCGTGCCCGAGGTATAAGCTGGCGTTCTCTCAGGGCAGAGTATCCAGTTATCTGTTTGATGGGATGGGTTACGCTCTGGTCAATAACATTGAGAGACGGGGCAGAATTGGAGTGGTCACCAGGTTCGATATTGAAGTACGAACAGTCGCCAACAATGGCATCCTCTTCCTCATGGTCAATCAGtcaaaTTTCTTTGTACTTGAACTGAAAAACGGATTCCTGCGGCTGGTGTATGATTTTGGCTTCGCTAACGGTCCCATCGTCATGGAGAGCAACTTGGCCAAACTGCAGATAAATGATGCCCGATATCACGAGGTGTCTGTGATTTACCACTTCTCCAAGAAGGTTGTTTTACTGGTGGACAGAGGATTTGTGAAATCTATGGAGAATGAGAAGAAACCGCTGCCTTTCTCTGATATTTACATTGGAGGAGCTCCATCCAACCTGCTTCTgtccaggcCTGAGCTGTCCTCTCTGGTGGGACTGAGGGGCTGCGTAAAGGGATTCCAGTTCCAGAAGAAAGACTTTAATCTATTGGAGGAGCCAGGAACTATAGGCATTAGTAGCGGCTGCCCAGAGGAATCTTTTATGTCACGCCAGGCATATTTCACAGGCGAGGGTTACCTGAGCTCAACAGCCAAGATCTCCCCGTTCAGCTCATTTGAAGGAGGAATGAACTTCAGAACGCTGCAGTCGTCCGGCCTGCTCTTCTACTACAATGAGGGGCCGAATGAGTTTACTCTCTCACTGGAGAACGGTGCTGTCGTGCTTCACTCCAAAGGAACAAAAGTTAAATCACAAGAAAAGAACTACAGTGATGGACGACCTCATTTCCTGGTGGTGTCTGTGACCAAGCAGAAgTATCAGATTGTTATTGATGACGGAGATAAGCAGAAGCAGAACAATTTGGATTCATCACAGACTGAAAACACTCTGAAGACGTTCTTCTATGGAGGATCtccatacaataaaatacagaactTCAGCGGCTGCATCAGCTACACTTACATtagcagGCAGGACCGGGATATAGAAGCAGAAGATTtccagcgctacactgagaatgGGAACGTGTCTCTGCAGGACTGTCCTGTGGAGAGACCACCCGCTGCTCTGATGTCTGCAGACAGAGCTCAGTCTACAGCGGCCTGCAAGGTGGGCAGGGATAAGACTGGTGTGCTGCAAGGCATTCTGGGATTGCAGAGTGACCCTATAGCAGCCCCAGAGGCAGAGGCCAAGCCTTGTTACATGATCCCACAGTCCCAGGCCAATACACATGCCCACCAGTTCAGCGGCTCTGCCCACAGCAGACAGGAGTATGATGGAGTGGCGGAGGGCATcagagagagatctcGTTTCTCTATGTCTGTAAAGACCCAGTCAGCAGCCGGTGTTGTGCTGTATGTGTCTGACGAGTCTGAGGAGAACTTTCTGTCCCTCTACCTGTCCCACGGAAAACTCTTCTTCACCTTCGGCTCCGGTCAGCAGAAGCTCCGCCTCCGCACCACCGACACGTACAACGACGGAGAGTGGCATGATATAAGTGTAACCAGGGACGGTGCTGTGGTAAAGCTGATAGTGGATAGACGGCCGGTGGTGGAGAACAGAAATTTCCCTATACTCCTCCAGGATCCACTCTACGTGGGAGGAGTCTCACCCGGGcgtgctctcaaacacataccGAAGACCTCTGTGTCCAGTCTATTAGGCTGTGTGAAGGACCTGCAGCTAAACGGACGCAGGATCTCCTCAGTTTCCTGCAGCTTTGGAGTCACACCTTGTTTAGAGGGTCCCGTCGAGTCTGGGGCCTATTTCTCTGAGGAGGGAGGATACGTGGTTCTGGACGACTCCTTCAGCTTGGGGGTTAAGTTtgaggtggtggtggaggtgcgCCCCCGTGTGGTCTCAGGTGTACTACTGCATGTCTTCTCTTCATCAGAAGAGTACCTGACTGTCTACCTCCACCAGGGCCAGGTGATGGCCCAGGTAAACAGTGGAGTCGGGGTTTTCTCTACACACGTTACTCCTCAGGAGGCCATCTGCGATGGAAACTGGCACAAAATCACAGTGATCAGAGACTCTAACGTGGTGCAGCTGATTGTGGACTCTGAAGTGACTCATGTGGTGGGACCCGTTAGCCCCATCACCTCGAACACAGAGACCACCAGAGCGCCCGTCTTCATTGGAGGAGCTCCAGATTCTCTGCTTCCTGTGGGTGTGGTCAGTAGGCGGGGCTTCTCAGGCTGTATGAGGAACCTGTTTGTGGGTGAATCTGCTGTGGATCTCAGCAAGGCGGCGCTGGTCAGCGGAGCTGTGAGCTTAAGCAGCTGCCCTGCTGCATAAACTGCTGCTCTGCTCCGTATCGCCACTGTGTCTTTAATAAACAACACAACGAAGCTACATCAGCACTTCTTCTGACATTTTCCTTCATCCCTGCACTTAATAATTACATGACTCGGCTGTGTCTCAAATCACACCAACACACTGTCTATAAACACCTAATGAGAATCTGATGTCCATAGGTGAACAGAAAGTAGCCACTGTGTCAAGATCAAGTCTGTGTGgatcataaacataaacatagaTACATTTACACCAATTATACAGAGCCTATTAACAGCAACAACAGCTGATTGGatggttaaaatgtgtttattaatgattattaatcaGGTCATGAACACACAAATATCATTACTACAGTTTTAACCCTAATAAACAAGAATACTTGCTTTACAAATAGTGAGCTATCATTCATTCacattgtttaaactcaaatattgCTGGTTCCTGATCTCACTGTCAAACTTCTCAGTTATTAAATGATTAGGAGCATTGATCATGAATGAAGTATGGATgagcaaatgaataaatacCAGTGTGTATAACTAACTACACATTTATTGCTTTCTTTTCACCCTTGTGTTCTCATTGATTGTAGCTCTTTGCTCGTTAACCTTTCATCTTTCACAGTACTGGATTCAGAGTTGGCAAAATTTCTAGATATCCAATCTTCTAGAAATTTGTCTGAGGCTAACAATGCATCACTCTAATCATGTTTTTAAGCCTTTTACACATTTCACAAACTCCAGTCCATAGCTTTTGTTGGCAATTTCCAAAATCAGTTCCTAAAGTCTTGTTTTAACTGAGTGGTAATTTGGATACAAAAATGTTCAAGTAAAATCACGTAATAATAAAGTTCTTGAGTTAAATTTTCCATGTCatcagtgttttaaaatgtagtgCTCAGTTCCatgatgttcatgtgtgtgtgtgatagtttaacagtcattttaacactgaaacacaTACTCCATGAGAACTTCTACCATCTGTTCTATACCATCACAGGTATAGAAGATGTTTGTTCACGATTCTGTTTTGGACacagtggttttaataaagAATTTATTTTCTCTATAATATTCCTTTATAACTAATACTTTGCACTTTTTAAGCCTGTGTTAAATGTTCAGTATTGACCACAGATCAGTGTTATTGTTCATTGTAAACTCAGAAAACCAAGAAACACGATCGATCAGTGACCTCAGATACCTTCGATCGGCAAAGACATGTTTGGAATCTGATGTGTGCTGCTTTAGTTTATAActggagatgctaggctaacactgctaacaacACTAGACTTAGACGGTCAccaatctaaccctaaaacacagccaaaatgtgctttatttactttacaaaCCAGCATAGATGGACCTTACTGACATGTGTACATTAAAGGTGGAACTGCATTGTCGTCCTTAAAACacctttttgtaattttattaaacactgtgctgaggtaaatgtggtTTTAAAAGGTTTTGTTTTTAGGTGTGTTTACAAAGATGTGAATAGTGACACTCTAACTCCTGTGTTCCTTAGCTTGTCCGTTAGCCTTTCAACTTCAACCCTACTATTACTAACTAAAGAAGCTCATGAAGCTTCAGTTGTGCTCCTTTATGAAGTGGGGAAAGGATGTGTCATGTGTCTGTTGGTTGTACCTCACTACTTtttgttaaacatttattaaaacctGTCTTTTTTACCTGTCCCTCCTTCTCAATAAAAGTTCCTGTTTTAAACAGCT

Function

NR:

description
laminin subunit alpha-4-like

GO:

id name namespace
GO:0045995 regulation of embryonic development biological_process
GO:0030155 regulation of cell adhesion biological_process
GO:0048514 blood vessel morphogenesis biological_process
GO:0016203 muscle attachment biological_process
GO:0030334 regulation of cell migration biological_process
GO:0030903 notochord development biological_process
GO:0005606 laminin-1 complex cellular_component
GO:0005102 signaling receptor binding molecular_function

KEGG:

id description
K06241 LAMA4; laminin, alpha 4

RNA

RNA id representative length rna type GC content exon number start site end site
XM_022678233.1 True 7640 mRNA 0.47 40 38526578 38577159

Neighbor

gene id symbol gene type direction distance location
hdac2 hdac2,LOC108416127 coding upstream 88514 38428649 ~ 38438064 (+)
hs3st5 hs3st5 coding upstream 98660 38416750 ~ 38427918 (+)
LOC103029663 NA coding upstream 126257 38381590 ~ 38400321 (+)
col10a1 col10a1,col10a1b,LOC108415286,LOC107548284,LOC107704357,LOC107710900 coding upstream 176254 38344389 ~ 38350324 (+)
LOC103045011 LOC103045011,LOC108414810 coding upstream 537645 37984712 ~ 37988933 (+)
tube1 tube1 coding downstream 2804 38579963 ~ 38606640 (+)
LOC103028301 LOC108415536,LOC107709524 coding downstream 68172 38645331 ~ 38662640 (+)
LOC111191700 LOC108415880 coding downstream 144518 38721677 ~ 38726048 (+)
traf3ip2 LOC107550525 coding downstream 152153 38729312 ~ 38742584 (+)
rev3l rev3l,LOC107569208,LOC104962055,LOC107396009,LOC107577708 coding downstream 170318 38747477 ~ 38800101 (+)
G24485 NA non-coding upstream 23060 38503227 ~ 38503518 (+)
G24476 NA non-coding upstream 33873 38449995 ~ 38492705 (+)
G24474 NA non-coding upstream 85918 38440352 ~ 38440660 (+)
G24437 ufl1 non-coding upstream 267329 38256201 ~ 38259249 (+)
G24432 NA non-coding upstream 280289 38243485 ~ 38246289 (+)
G24531 NA non-coding downstream 4468 38581627 ~ 38582793 (+)
G24535 NA non-coding downstream 13782 38590941 ~ 38592527 (+)
G24541 NA non-coding downstream 39943 38617102 ~ 38617433 (+)
G24542 wisp3 non-coding downstream 40327 38617486 ~ 38617866 (+)
G24543 wisp3 non-coding downstream 43083 38620242 ~ 38620480 (+)
G24463 NA other upstream 144268 38359335 ~ 38382310 (+)
LOC111191729 LOC108416192 other upstream 147242 38359460 ~ 38379336 (+)
G24431 NA other upstream 289537 38232593 ~ 38237041 (+)
G24390 NA other upstream 428254 38092974 ~ 38098324 (+)
G24345 cwc15,LOC107747811,LOC107597228,LOC107732607 other upstream 592589 37928355 ~ 37933989 (+)
G24534 NA other downstream 8280 38585439 ~ 38586278 (+)
fyn fynb,fyn,LOC107704353,LOC103458010 other downstream 90350 38667509 ~ 38717435 (+)
G24594 smim8 other downstream 348537 38925696 ~ 38926982 (+)
G24583 NA other downstream 362198 38939357 ~ 38947222 (+)
G24719 NA other downstream 468011 39045170 ~ 39045781 (+)

Expression


Co-expression Network