G60376


Basic Information

Item Value
gene id G60376
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000009
NCBI id null
chromosome length 16003125
location 15745468 ~ 15746486 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU68729
CTCTTCTCGTTCGCTACAAATAATCGGCTCTTAGAGCCGGTTCGTTCGCGAACGACACATCACTAGTTGTCATCTAGTTTTCTTTTTTGATATTTTTGTTTCCTTATCATTTATGTCACGTGACATACACGTTGCAACACAGTGACTTTGATGTAGACACCAGTTTAGAAGTGAAGTGCTTTTCTTATTTTTATTTTCATTAGTTAGGTTAGACGTCGAACTTATTTAGATTGCTTTTGTTTTGTTCTTTTCTTTTCTTTGGTGCCACTTGTGTCCTTTTCCCCAGTTTATTATTTTTGTTTTCTTCTATTCTGTAAATATTGTATATATTTTTCCTTTGGCTATTTTGATAATTTTTCATTATTTCTACTATCATTATTGTTATCTCATGCCATTTCCCTTAATTGTAAAATAAACTGTTTGGCAGGTTTGTGTAGTGTTCTGTCTCTTGCACATATAATGATCACAATCTCAATGTTGCCTCTTCTAACCCTAGACCAAAATTAGGAAGTTGTAACAATCAGGATATTTCTAAACATACTGTACTTATAAACATCCAATTTGATATTTTATTTAAGATACAGCAATTAACATTTCTTTTGCATAAAAGAAATCTTTATTATCGCAACAGCAAGAGAGAGTCATTCTAACAACAAGATGTTGTAAAGTATTACCAGGTAAATCCTAGTCTTTTCTTGGACTTCTGGATATCAGAGGTCTCGTTCAGCTCTTTTATGTTTTGAGTGGTGCCGCTCACATAATTGGGCATCTGAACACCCGACTCATCGTGGACTAGATAACTTGGTCTAAGTCCACTGAACATGGGCCCCAGGCCCCCTCCGATGCCCTCTCTGCCAGCCTTCAGGAGTGGGTAGATGTTTCTCCCTCCCTTCTCGGCTGTTTCGATGACTTGTTTGGCGTATTTCTGGAACTGGTTTTCCTCCTCAACAATGAGAGCGGTGTTCCTCTCCACAAAGTCCTTCTGTTCTTTTTTCGTACGTTGATCCTTTGCGCGTTTT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU68729 True 1019 lncRNA 0.37 1 15745468 15746486

Neighbor

gene id symbol gene type direction distance location
CI01000009_15726357_15736168 PHGDH coding downstream 9300 15726145 ~ 15736168 (-)
CI01000009_15716557_15721525 KLHL23 coding downstream 23872 15716477 ~ 15721596 (-)
CI01000009_15693066_15694538 UGT5B4, UGT5B6 coding downstream 50839 15692994 ~ 15694629 (-)
CI01000009_15654061_15662554 ARPC2 coding downstream 82442 15653760 ~ 15663026 (-)
CI01000009_15504401_15585060 NA coding downstream 159639 15503406 ~ 15585829 (-)
CI01000009_15784118_15789896 KLHL41, KLHL41A coding upstream 37594 15784080 ~ 15789896 (-)
CI01000009_15791178_15798430 BBS5.L, BBS5 coding upstream 44363 15790849 ~ 15798430 (-)
CI01000009_15802365_15836680 COL28A1A coding upstream 55862 15802348 ~ 15836684 (-)
CI01000009_15847186_15853675 CCDC89 coding upstream 100432 15846918 ~ 15853675 (-)
CI01000009_15975897_15978506 RDH1 coding upstream 229244 15975730 ~ 15978506 (-)
G60469 NA non-coding downstream 26307 15718562 ~ 15719161 (-)
G60468 NA non-coding downstream 33321 15708004 ~ 15712147 (-)
G60442 NA non-coding downstream 96091 15589657 ~ 15649377 (-)
G60439 NA non-coding downstream 195589 15549582 ~ 15549879 (-)
G60472 NA non-coding upstream 4212 15750698 ~ 15750994 (-)
G60367 NA non-coding upstream 34813 15781299 ~ 15798959 (-)
G60479 NA non-coding upstream 56401 15802887 ~ 15803791 (-)
CI01000009_15318811_15390382 TNS1 other downstream 302421 15318811 ~ 15390382 (-)
G59941 NA other downstream 612965 15132104 ~ 15132503 (-)
G59811 NA other downstream 858004 14862397 ~ 14887464 (-)
G59490 NA other downstream 1707595 14033564 ~ 14037873 (-)

Expression


Co-expression Network