G60293


Basic Information

Item Value
gene id G60293
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000009
NCBI id null
chromosome length 16003125
location 15748520 ~ 15749113 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU68611
ATGGGGTTTTACATACCGACAAGCGGGACTTCCGGTACCTGGCAGAGCAATCCCTTAAGTTATAAAGTTCACTGAACCGAGAAATAACGCGTCACACATATACCAAATAAACTCATTAGTATTCCGCGCGCACACATGAAAAATAGGCTACAATTTGCGTCCCTAGCAGAAGGGCACCAGTTACTCACAGCACTGGAACTATATATAGCAGAGGAACCAACCCTCTTAAACGGTACAATAAGTACCCACGAGCAGACACCAGCTGCAAAGAAAAGTTAGTCAACAAACAATACGTAAGCCAAACCATAGCCATGCTGAACGAACACCTACCTCCGACACAGAGCAGAGGAGTACCGGTGTCCTTTCATCCTACCCGTCAGATTGTCCGGGCTTACTGCACGTGCGCACATCAATATTACATCATTTTTGTCATGATAACACAAAATTACTGTATTTGCATTATTGTAAGGGTAGGTTTAGTGTTGGGGTAGGTGTAGATGTTAATAAAGCCATAAACCACGTTAATATCACGGTGGAAGCACAATCTGATAGGTAGCATTTTTCGCTGTCAGATTTTGCTACCCACTGTTTCAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU68611 True 594 lncRNA 0.43 1 15748520 15749113

Neighbor

gene id symbol gene type direction distance location
CI01000009_15738136_15745816 CCDC173 coding upstream 2654 15738072 ~ 15745866 (+)
CI01000009_15708273_15712002 METTL5 coding upstream 36518 15706460 ~ 15712005 (+)
CI01000009_15680573_15681601 NA coding upstream 66544 15680573 ~ 15681976 (+)
CI01000009_15667251_15668333 NA coding upstream 79070 15667251 ~ 15669450 (+)
CI01000009_15637754_15643935 NA coding upstream 104585 15637650 ~ 15643935 (+)
CI01000009_15770057_15782295 FASTKD1 coding downstream 20944 15770057 ~ 15783049 (+)
CI01000009_15872202_15973125 LRP2, LRP2A coding downstream 123089 15872202 ~ 15973231 (+)
CI01000009_15992272_16002225 ABCB11, ABCB11A coding downstream 243159 15992272 ~ 16002225 (+)
G60286 NA non-coding upstream 50373 15697779 ~ 15698147 (+)
G60280 NA non-coding upstream 53929 15677482 ~ 15694591 (+)
G60213 NA non-coding upstream 85825 15662473 ~ 15662695 (+)
G60222 NA non-coding upstream 191619 15556519 ~ 15556901 (+)
G60221 NA non-coding upstream 192687 15555606 ~ 15555833 (+)
G60303 NA non-coding downstream 50568 15799681 ~ 15801256 (+)
G60028 NA other upstream 372351 15352047 ~ 15376169 (+)
CI01000009_14925314_14952223 NA other upstream 792725 14924621 ~ 14952571 (+)
CI01000009_14857765_14859526 NA other upstream 889876 14857713 ~ 14859636 (+)
G58711 NA other upstream 974747 14766659 ~ 14773773 (+)

Expression


Co-expression Network