erp44 (erp44,LOC107593692,LOC107723539,LOC107706132)


Basic Information

Item Value
gene id erp44
gene name erp44,LOC107593692,LOC107723539,LOC107706132
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035899.1
NCBI id CM008302.1
chromosome length 74127438
location 6293072 ~ 6323895 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_022679550.1
TGCCGAACGAAGTCAGCTAGCTTAGCTGAGCGAGCCGTCCGCCGTTTCCTTGCAGCAGAGGAGAGGAGGTGGTGTCGAGAGACTGGGGAGACATTCAGCAACATCATAACCTCAACCAGCGCTGCTGTACGATGAAATTAACTTCATTTATGCCTGCCCACGAACTCCACTACTTTACCTTACTACTGGTAACCGGACTGTACACTCCAGTGCGGGCAGAGATTACCAGTCTGGATGCGGGGAACATCGATGACATACTTAATAATGCTGGAGTGGCTTTAGTCAACTTCTATGCAGACTGGTGTCGGTTCAGTCAGATGCTGCACCCGATCTTTGAAGAAGCCTCTAATGTGGTGAGGGAGGAGTATCCAGACACATCGCAGGTGGTGTTTGCTCGGGTGGACTGTGACCAACAtaCTGATATAGCACAGCGCTACAGGATCAGTAAGTACCCCACCTTAAAGCTCTTCAGGAATGGCATGATGATGAAGAGGGAGtacagaggtcagaggtcagtgACGGCCATCGCAGACTTCATACGGCAGCAGAAAGTGGATCCCATCTCAGAGATTCAGAGCCTGGAAGAGGTCACCAAAATAGATAGATCTAGACGAACCATTATAGGCTACTTTGAGCAGAAGAACTCAGACAATTACCATGCATACGAAAAAGTGGCCAACATCCTGCGAGATGACTGCGCCTTCATGGCAGCGTTTGGCGAGGTGTCCAAGCCGGAGCGCTTCAGTGGAGATAACGTTATCTATAAACCATTAGGAGAGAACGCTCCTGACATGGTCTACCTAGGTTCACTCACAAACTTTGACCTGGTCTATGCCTGGGCACAGGACAAGTGCGTGCCCCTGGTGCGAGAGATCACTTTCGAAAATGGAGAGgaGCTGACAGAAGAGGGCATTCCATTCCTAATTCTCTTCCATCAGAAGGAGGACACGGACAGTCTGGAGAAGTTCCAACACGAGGTGGCTCGCCAGCTGATCAGCGAGAAGGGCTCTATAAATTTCTTACACGCTGATTGTGAAAAGTTTCGGCATCCTCTGCTGCACATCCAGAAGACTCCAGCTGACTGCCCTGTCATAGCTATCGATAGTTTCCGTCACATGTATGTCTTCCCAGAATTCAGCGACCTTGCGGTTCCTGGAAAACTGCGGCAGTTTGTGCTGGATCTTCACTCTGGAAAGTTGCATAGAGAGTTCCACCACGGGCCTGACCCCACAGACAGCACCCCAGGACAGCCGGAGGGTCCTAATGAAGTGGCCAGCAGTCCCCCAGAGAGCTCCTTCCAGAAACTGGCCCCCAGCGAGACGCGCTACACCATCCTCAGCAGGGACCGGGACGAACTGTGACCTCCACCCACGACAAAGCTACCGTATCATCACCCAGCCCAGAACCCAGGCGGCCAGCTGCTGCTGCATCACCTCtattttcttaacttttattttggataaaaagagaagtttttttctttttggtgagatggagagagaaagagagtgagaggaagattgattttacttttatttttggaGCTTGTAAATATGTATGTGCTCAGTGGGTCAGTCTCGTCTAAATTAAatatggattttctttttttctttttttttcttctttttttttgtcgaCCCCTAGGTTTTTGTCTATCTACTTTTTTTGTAGGAAGAGAAA

Function

symbol description
erp44 Acts upstream of or within heart development and regulation of cardiac muscle contraction by calcium ion signaling. Orthologous to human ERP44 (endoplasmic reticulum protein 44).

NR:

description
PREDICTED: endoplasmic reticulum resident protein 44

GO:

id name namespace
GO:0045454 cell redox homeostasis biological_process

KEGG:

id description
K17264 ERP44, TXNDC4; endoplasmic reticulum resident protein 44

RNA

RNA id representative length rna type GC content exon number start site end site
XM_022679550.1 True 1680 mRNA 0.49 11 6293072 6323895

Neighbor

gene id symbol gene type direction distance location
tex10 tex10,LOC107706105,LOC107689903 coding upstream 63613 6185481 ~ 6229459 (+)
LOC103023602 LOC107579097 coding upstream 213021 6049397 ~ 6080051 (+)
tbrg4 NA coding upstream 260329 6012790 ~ 6032743 (+)
znf804b NA coding upstream 628429 5440694 ~ 5664643 (+)
LOC103032089 stoml3,LOC102781741,LOC105011208,LOC108236983 coding upstream 1084109 5198691 ~ 5208963 (+)
alg2 alg2,LOC107595974,LOC107706186 coding downstream 220380 6544275 ~ 6552001 (+)
frrs1l frrs1l,LOC107595962 coding downstream 269572 6593467 ~ 6603875 (+)
tmem245 tmem245,LOC107687814,LOC107706205,LOC107723436,LOC107595951 coding downstream 283090 6606985 ~ 6641935 (+)
trnat-ugu NA coding downstream 326810 6650705 ~ 6650777 (+)
trnat-ugu_1 NA coding downstream 328085 6651980 ~ 6652052 (+)
G16779 NA non-coding upstream 59976 6231265 ~ 6233096 (+)
G16777 NA non-coding upstream 76455 6214586 ~ 6216617 (+)
G16755 glipr2,glipr2l,LOC107706057,LOC107689891 non-coding upstream 192722 6091736 ~ 6100350 (+)
G16739 LOC108426361,LOC108256403 non-coding upstream 285024 6002303 ~ 6008048 (+)
G16736 NA non-coding upstream 336193 5955445 ~ 5956879 (+)
G16799 NA non-coding downstream 33669 6357564 ~ 6360468 (+)
LOC111194764 NA non-coding downstream 91967 6415862 ~ 6438882 (+)
G16824 NA non-coding downstream 212984 6536879 ~ 6538980 (+)
G16828 NA non-coding downstream 250642 6574537 ~ 6574776 (+)
G16829 NA non-coding downstream 251051 6574946 ~ 6575225 (+)
LOC103025913 NA other upstream 115188 6168760 ~ 6177884 (+)
LOC103038305 NA other upstream 1775763 4515997 ~ 4517309 (+)
nrgn NA other upstream 4121865 2150630 ~ 2171207 (+)
G15839 NA other upstream 4611050 1681159 ~ 1682022 (+)
fdxacb1 fdxacb1 other upstream 4763655 1516497 ~ 1529417 (+)
G16820 NA other downstream 208501 6532396 ~ 6532868 (+)
LOC103032995 NA other downstream 1098676 7422571 ~ 7429391 (+)
LOC103041197 NA other downstream 1844944 8168839 ~ 8184837 (+)
G17414 NA other downstream 2351724 8675619 ~ 8716787 (+)
LOC111191971 NA other downstream 2567349 8891244 ~ 8899645 (+)

Expression


Co-expression Network