LOC103025538 (epb41l4b,LOC108443285,LOC108256379,LOC107706320)


Basic Information

Item Value
gene id LOC103025538
gene name epb41l4b,LOC108443285,LOC108256379,LOC107706320
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035899.1
NCBI id CM008302.1
chromosome length 74127438
location 7179416 ~ 7236402 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_022679669.1
GTGCATCAGTTTCGGTCAGGAGGGAAAGCAGGGGGAAATCCGGAGCGGCGAGGCAGCGGGGGGCCCGGCCACCGTCCCACAGCCTGCGCGGAGAACCAGAGCCTCGGCTAGCGGGAGTTCGAGCCCCGCTGGAGGGTTTTAATCCTCTTTAGTGAAAGAAAGATTAGAacagaagaggagaagaaggaaaaagcTGAGGAAAAGCTCCAGAAGCTGCCGGGGGACTCCAGGCAGGTGTGCGGGCTGTTGTCGTGCTGTTTCTGGACACGAAACCGCTGAGTGACCGGAGCAGCTGCTGGAGGTCGGCGTCTTCCTCGCTGAACGTGTCGCCGGGGCAGCGCGTTCGAACTCCCGCGTCGCTCCGCGGTCGTGCCCCGCTGGTGGCTTGTGGTTGTGGTGGTGGCTGGCGGTGGTTGTTAAGGAGAATCTGAAGGAGAAAGGATGATGGGATTTCTGCGCAGGACGTTTAGTCTCCGCTCACGGAGGCGCTTTCGGCACTCGGGTGAGCTGGACGGCAGCGGCGGGAcaccgcagcagcagcaggtggtCCACGGCGCTGGGGGAGCAGGAGCTCTGGTGGCCCCGGGGACCGTGGTGCACATCCCCGCCGCGGGCAACAGCAAGGCGGCCATCACCTGCAGGGTGCAGCTGCTGGACCTGTCGGAGGTCAGCGTGGAGTTGCCGaAACATTCGAAGGGACAGGACCTGTTTGATCAGATCATGTATCATCTGGACCTGGTGGAGGCGGATTATTTTGGCCTGCAGTTCATGGACCCTGAGCAGGTTATGCACTGGCTGGATGCAACCAAACCCATAAAGAAGCAGATTAGATaCGGCCCTCCATACAAGTTGTATTTCAAAGTGAAGTTCTATTCCTCTGAACCCAACAACCTTCATGAGGAGTTCACCAGGTACCTCTTTGTGCTGCAGCTTAGACAAGACATTATGACTGGCAAGTTAAAGTGTCCATATGATGTATCTGTGGAGCTTGGGGCTTATTGCCTACAGAgtgagcTGGGAGACTGTGACCCATTGGAACACTCTCCGTTGCTGGTGTCGGAGTTTCGGTTTTGTCCTAAGCAGACAGAGATAATGGAGGCTGATATTTACCGCAAGTGGGCAGAGTCCAGGGGAATGAGTCCATCGCAGGCCGAGCTAAATTTCCTGAATAAGTGTAAGTGGCTGGAGATGTACGGAGTGGACATGCACTATGTGAAGGGTCGTGATGGAGGAGATTACGCTCTGGGTCTTACTCCAACTGGAATTCTGGTGTTTGAAAGGTCCAGTAAAATTGGCCTGTTCTTTTGGCCTAAAATCACACGTCTGGACTTTAAGAAGAACAGGCTCACACTTGTGGTGGTAGAAGATGATGAACAGGGCCACGAGCAAGAGCACACGTTTGTgttccagctctccagctcgCGGGTTTGTAAACAGCTGTGGAAGTGCGCTGTGGAGAGCCATTCATTTTTCCGCCTTAGACAGCCCACCCAGAACAAGACCAACCGCAATGACTTCACACGCCTCGGCTCACGCTTCCGCTTCAgTGGAAGGACAGAGTATCAGGCGACTCATTCGGGCAGAGTGAGGAGGGCCagcacttttgagagacgaccAAGCAAAAGATACCCCTCCAGAACCCAGTCGCTGGGCAAAGttaCTCCTGCAAAACATCAACATCTAAGTGCTCAGCCCAGCCCTGACCCCAACCTAAAACCGTATCAACACAACATACCAATTGGTCAGGAGTCTTGGGTGAGGCCCCTCCCCCCAAGCTTGACCCCATCCCACTACATACAGCCCACTGAATTAGgacccccaccaccacctcaCAGttttCCTCTCAGCAGTGCAGATACACAGAGGTTCAGTATGGAAGAGAATGAAGCTCCACATGCTGGAAAAGTCCATCGCTGCTACCATCGCCATGCCTACGAGAAACAGGAAGCCCCGTGTCTTTCTTTACCCAAACCCAAGCCTTGGGTTATCTCTGCTGGACACCCTGAAGAGTATGACCGCCCTCTGCCAAGCCCAAATCATCTGGACCTGGAGTCCACACCCTGGCCAGCCCTTCACATCAACATCGACACAGTCAGTGCTGCACAGGCCGAGGAGAAGCCGTTATCAGAGAAAAGCCTCCCCTCGTCTCCCTCTGGCTTACAGGATCAACTCAAAAGCAATATACTGAGACatgtgagacagagtgagagcgGTGGAAGCTCGAGGGGGAACTCCTCCAGTGGAGACCAGAACAACAGACTTCCCAGCTCCTCTCAGGATTCAGCCTCCAGCAGTGTGAATCTGGAGAGGCCGAGAGTGGAGCGCCGCAAACGCCTCGTCAGACAGTACAGCTTCAACCACAGTGATGAAGATGACCTCCCAGAAGCACTTGCTGCCATATCTTCTGAGAGCAGCATGGGAAAATCCACGTCCAGCAGCTCTCTGGACAAACAGGTCCAGCCTCCAATCTACCCACCGCAGAAAAGTGTCCCACCGCCACTGGAGCACTGTGACAAATCCCCTCTGTTCTATCCAAGCCCAGTCCCTCACCTACTGCCATTCAGCCCACACTCCAACagCAATGAAGAGCTGAAAATGGATCGAGAGAAACTGCTGAGAGCCTTATTAATGACAGAGCTCTGAAACCATATGGACGTCCAGATGCATTATATAACCGAACAgaacaccttaaattcattgCACTGTACTTTTTATACATTCacacaacaaaacagaaaactattttttaacgATGAAGCTTATCTCCTATACAGTAAACCACATCCGCAGATCCATCCATGTTTATATGTGTAATTTTATCCCCTGTTTATATGTCCTGATGGCTTTGAACTGTGCCTGGAAGTCATGTTACAGTAATGTTGCATAATCTTTTCTTACTGGGTTCTCTGTTGGCTTGTCAGGCTTCTTATTTCTATTCACTGAAGCACATTGTGAAGAGCAGAATCTCACGGGGACGCGTTTGTTTGAGTTACACCTGATATACGTGACACCCTGTACATACTGACTGTAAATACGCTGTATAGAGTGAACACTATCATTTTCAATGTGCTTTCTAACATTTTAAGGGGAATTTTTTGCAAACGTGATGCAGTATTtcattttatatgcatttctgCTCCCAGTGTGATAAACAAACACTTGCTGAATAAATCTGCTTTCTTCTCAATTT
>XM_022679674.1
GGTGCATCAGTTTCGGTCAGGAGGGAAAGCAGGGGGAAATCCGGAGCGGCGAGGCAGCGGGGGGCCCGGCCACCGTCCCACAGCCTGCGCGGAGAACCAGAGCCTCGGCTAGCGGGAGTTCGAGCCCCGCTGGAGGGTTTTAATCCTCTTTAGTGAAAGAAAGATTAGAacagaagaggagaagaaggaaaaagcTGAGGAAAAGCTCCAGAAGCTGCCGGGGGACTCCAGGCAGGTGTGCGGGCTGTTGTCGTGCTGTTTCTGGACACGAAACCGCTGAGTGACCGGAGCAGCTGCTGGAGGTCGGCGTCTTCCTCGCTGAACGTGTCGCCGGGGCAGCGCGTTCGAACTCCCGCGTCGCTCCGCGGTCGTGCCCCGCTGGTGGCTTGTGGTTGTGGTGGTGGCTGGCGGTGGTTGTTAAGGAGAATCTGAAGGAGAAAGGATGATGGGATTTCTGCGCAGGACGTTTAGTCTCCGCTCACGGAGGCGCTTTCGGCACTCGGGTGAGCTGGACGGCAGCGGCGGGAcaccgcagcagcagcaggtggtCCACGGCGCTGGGGGAGCAGGAGCTCTGGTGGCCCCGGGGACCGTGGTGCACATCCCCGCCGCGGGCAACAGCAAGGCGGCCATCACCTGCAGGGTGCAGCTGCTGGACCTGTCGGAGGTCAGCGTGGAGTTGCCGaAACATTCGAAGGGACAGGACCTGTTTGATCAGATCATGTATCATCTGGACCTGGTGGAGGCGGATTATTTTGGCCTGCAGTTCATGGACCCTGAGCAGGTTATGCACTGGCTGGATGCAACCAAACCCATAAAGAAGCAGATTAGATaCGGCCCTCCATACAAGTTGTATTTCAAAGTGAAGTTCTATTCCTCTGAACCCAACAACCTTCATGAGGAGTTCACCAGGTACCTCTTTGTGCTGCAGCTTAGACAAGACATTATGACTGGCAAGTTAAAGTGTCCATATGATGTATCTGTGGAGCTTGGGGCTTATTGCCTACAGAgtgagcTGGGAGACTGTGACCCATTGGAACACTCTCCGTTGCTGGTGTCGGAGTTTCGGTTTTGTCCTAAGCAGACAGAGATAATGGAGGCTGATATTTACCGCAAGTGGGCAGAGTCCAGGGGAATGAGTCCATCGCAGGCCGAGCTAAATTTCCTGAATAAGTGTAAGTGGCTGGAGATGTACGGAGTGGACATGCACTATGTGAAGGGTCGTGATGGAGGAGATTACGCTCTGGGTCTTACTCCAACTGGAATTCTGGTGTTTGAAAGGTCCAGTAAAATTGGCCTGTTCTTTTGGCCTAAAATCACACGTCTGGACTTTAAGAAGAACAGGCTCACACTTGTGGTGGTAGAAGATGATGAACAGGGCCACGAGCAAGAGCACACGTTTGTgttccagctctccagctcgCGGGTTTGTAAACAGCTGTGGAAGTGCGCTGTGGAGAGCCATTCATTTTTCCGCCTTAGACAGCCCACCCAGAACAAGACCAACCGCAATGACTTCACACGCCTCGGCTCACGCTTCCGCTTCAgTGGAAGGACAGAGTATCAGGCGACTCATTCGGGCAGAGTGAGGAGGGCCagcacttttgagagacgaccAAGCAAAAGATACCCCTCCAGAACCCAGTCGCTGGGCAAAGttaCTCCTGCAAAACATCAACATCTAAGTGCTCAGCCCAGCCCTGACCCCAACCTAAAACCGTATCAACACAACATACCAATTGGTCAGGAGTCTTGGGTGAGGCCCCTCCCCCCAAGCTTGACCCCATCCCACTACATACAGCCCACTGAATTAGgacccccaccaccacctcaCAGttttCCTCTCAGCAGTGCAGATACACAGAGGTTCAGTATGGAAGAGAATGAAGCTCCACATGCTGGAAAAGTCCATCGCTGCTACCATCGCCATGCCTACGAGAAACAGGAAGCCCCGTGTCTTTCTTTACCCAAACCCAAGCCTTGGGTTATCTCTGCTGGACACCCTGAAGAGTATGACCGCCCTCTGCCAAGCCCAAATCATCTGGACCTGGAGTCCACACCCTGGCCAGCCCTTCACATCAACATCGACACAGTCAGTGCTGCACAGGCCGAGGAGAAGCCGTTATCAGAGAAAAGCCTCCCCTCGTCTCCCTCTGGCTTACAGGATCAACTCAAAAGCAATATACTGAGACatgtgagacagagtgagagcgGTGGAAGCTCGAGGGGGAACTCCTCCAGTGGAGACCAGAACAACAGACTTCCCAGCTCCTCTCAGGATTCAGCCTCCAGCAGTGTGAATCTGGAGAGGCCGAGAGTGGAGCGCCGCAAACGCCTCGTCAGACAGTACAGCTTCAACCACAGTGATGAAGATGACCTCCCAGAAGCACTTGCTGCCATATCTTCTGAGAGCAGCATGGGAAAATCCACGTCCAGCAGCTCTCTGGACAAACAGGTCCAGCCTCCAATCTACCCACCGAAAAGTGTCCCACCGCCACTGGAGCACTGTGACAAATCCCCTCTGTTCTATCCAAGCCCAGTCCCTCACCTACTGCCATTCAGCCCACACTCCAACagCAATGAAGAGCTGAAAATGGATCGAGAGAAACTGCTGAGAGCCTTATTAATGACAGAGCTCTGAAACCATATGGACGTCCAGATGCATTATATAACCGAACAgaacaccttaaattcattgCACTGTACTTTTTATACATTCacacaacaaaacagaaaactattttttaacgATGAAGCTTATCTCCTATACAGTAAACCACATCCGCAGATCCATCCATGTTTATATGTGTAATTTTATCCCCTGTTTATATGTCCTGATGGCTTTGAACTGTGCCTGGAAGTCATGTTACAGTAATGTTGCATAATCTTTTCTTACTGGGTTCTCTGTTGGCTTGTCAGGCTTCTTATTTCTATTCACTGAAGCACATTGTGAAGAGCAGAATCTCACGGGGACGCGTTTGTTTGAGTTACACCTGATATACGTGACACCCTGTACATACTGACTGTAAATACGCTGTATAGAGTGAACACTATCATTTTCAATGTGCTTTCTAACATTTTAAGGGGAATTTTTTGCAAACGTGATGCAGTATTtcattttatatgcatttctgCTCCCAGTGTGATAAACAAACACTTGCTGAATAAATCTGCTTTCTTCTCAATTT
>XM_022679678.1
GTGCATCAGTTTCGGTCAGGAGGGAAAGCAGGGGGAAATCCGGAGCGGCGAGGCAGCGGGGGGCCCGGCCACCGTCCCACAGCCTGCGCGGAGAACCAGAGCCTCGGCTAGCGGGAGTTCGAGCCCCGCTGGAGGGTTTTAATCCTCTTTAGTGAAAGAAAGATTAGAacagaagaggagaagaaggaaaaagcTGAGGAAAAGCTCCAGAAGCTGCCGGGGGACTCCAGGCAGGTGTGCGGGCTGTTGTCGTGCTGTTTCTGGACACGAAACCGCTGAGTGACCGGAGCAGCTGCTGGAGGTCGGCGTCTTCCTCGCTGAACGTGTCGCCGGGGCAGCGCGTTCGAACTCCCGCGTCGCTCCGCGGTCGTGCCCCGCTGGTGGCTTGTGGTTGTGGTGGTGGCTGGCGGTGGTTGTTAAGGAGAATCTGAAGGAGAAAGGATGATGGGATTTCTGCGCAGGACGTTTAGTCTCCGCTCACGGAGGCGCTTTCGGCACTCGGGTGAGCTGGACGGCAGCGGCGGGAcaccgcagcagcagcaggtggtCCACGGCGCTGGGGGAGCAGGAGCTCTGGTGGCCCCGGGGACCGTGGTGCACATCCCCGCCGCGGGCAACAGCAAGGCGGCCATCACCTGCAGGGTGCAGCTGCTGGACCTGTCGGAGGTCAGCGTGGAGTTGCCGaAACATTCGAAGGGACAGGACCTGTTTGATCAGATCATGTATCATCTGGACCTGGTGGAGGCGGATTATTTTGGCCTGCAGTTCATGGACCCTGAGCAGGTTATGCACTGGCTGGATGCAACCAAACCCATAAAGAAGCAGATTAGATaCGGCCCTCCATACAAGTTGTATTTCAAAGTGAAGTTCTATTCCTCTGAACCCAACAACCTTCATGAGGAGTTCACCAGGTACCTCTTTGTGCTGCAGCTTAGACAAGACATTATGACTGGCAAGTTAAAGTGTCCATATGATGTATCTGTGGAGCTTGGGGCTTATTGCCTACAGAgtgagcTGGGAGACTGTGACCCATTGGAACACTCTCCGTTGCTGGTGTCGGAGTTTCGGTTTTGTCCTAAGCAGACAGAGATAATGGAGGCTGATATTTACCGCAAGTGGGCAGAGTCCAGGGGAATGAGTCCATCGCAGGCCGAGCTAAATTTCCTGAATAAGTGTAAGTGGCTGGAGATGTACGGAGTGGACATGCACTATGTGAAGGGTCGTGATGGAGGAGATTACGCTCTGGGTCTTACTCCAACTGGAATTCTGGTGTTTGAAAGGTCCAGTAAAATTGGCCTGTTCTTTTGGCCTAAAATCACACGTCTGGACTTTAAGAAGAACAGGCTCACACTTGTGGTGGTAGAAGATGATGAACAGGGCCACGAGCAAGAGCACACGTTTGTgttccagctctccagctcgCGGGTTTGTAAACAGCTGTGGAAGTGCGCTGTGGAGAGCCATTCATTTTTCCGCCTTAGACAGCCCACCCAGAACAAGACCAACCGCAATGACTTCACACGCCTCGGCTCACGCTTCCGCTTCAgTGGAAGGACAGAGTATCAGGCGACTCATTCGGGCAGAGTGAGGAGGGCCagcacttttgagagacgaccAAGCAAAAGATACCCCTCCAGAACCCAGTCGCTGGGCAAAGttaCTCCTGCAAAACATCAACATCTAAGTGCTCAGCCCAGCCCTGACCCCAACCTAAAACCGTATCAACACAACATACCAATTGGTCAGGAGTCTTGGGTGAGGCCCCTCCCCCCAAGCTTGACCCCATCCCACTACATACAGCCCACTGAATTAGgacccccaccaccacctcaCAGttttCCTCTCAGCAGTGCAGATACACAGAGGTTCAGTATGGAAGAGAATGAAGCTCCACATGCTGGAAAAGTCCATCGCTGCTACCATCGCCATGCCTACGAGAAACAGGAAGCCCCGTGTCTTTCTTTACCCAAACCCAAGCCTTGGGTTATCTCTGCTGGACACCCTGAAGAGTATGACCGCCCTCTGCCAAGCCCAAATCATCTGGACCTGGAGTCCACACCCTGGCCAGCCCTTCACATCAACATCGACACAGCCGAGGAGAAGCCGTTATCAGAGAAAAGCCTCCCCTCGTCTCCCTCTGGCTTACAGGATCAACTCAAAAGCAATATACTGAGACatgtgagacagagtgagagcgGTGGAAGCTCGAGGGGGAACTCCTCCAGTGGAGACCAGAACAACAGACTTCCCAGCTCCTCTCAGGATTCAGCCTCCAGCAGTGTGAATCTGGAGAGGCCGAGAGTGGAGCGCCGCAAACGCCTCGTCAGACAGTACAGCTTCAACCACAGTGATGAAGATGACCTCCCAGAAGCACTTGCTGCCATATCTTCTGAGAGCAGCATGGGAAAATCCACGTCCAGCAGCTCTCTGGACAAACAGGTCCAGCCTCCAATCTACCCACCGCAGAAAAGTGTCCCACCGCCACTGGAGCACTGTGACAAATCCCCTCTGTTCTATCCAAGCCCAGTCCCTCACCTACTGCCATTCAGCCCACACTCCAACagCAATGAAGAGCTGAAAATGGATCGAGAGAAACTGCTGAGAGCCTTATTAATGACAGAGCTCTGAAACCATATGGACGTCCAGATGCATTATATAACCGAACAgaacaccttaaattcattgCACTGTACTTTTTATACATTCacacaacaaaacagaaaactattttttaacgATGAAGCTTATCTCCTATACAGTAAACCACATCCGCAGATCCATCCATGTTTATATGTGTAATTTTATCCCCTGTTTATATGTCCTGATGGCTTTGAACTGTGCCTGGAAGTCATGTTACAGTAATGTTGCATAATCTTTTCTTACTGGGTTCTCTGTTGGCTTGTCAGGCTTCTTATTTCTATTCACTGAAGCACATTGTGAAGAGCAGAATCTCACGGGGACGCGTTTGTTTGAGTTACACCTGATATACGTGACACCCTGTACATACTGACTGTAAATACGCTGTATAGAGTGAACACTATCATTTTCAATGTGCTTTCTAACATTTTAAGGGGAATTTTTTGCAAACGTGATGCAGTATTtcattttatatgcatttctgCTCCCAGTGTGATAAACAAACACTTGCTGAATAAATCTGCTTTCTTCTCAATTT

Function

symbol description
epb41l4b Predicted to enable cytoskeletal protein binding activity. Predicted to be involved in actomyosin structure organization. Predicted to be active in cytoskeleton. Orthologous to human EPB41L4B (erythrocyte membrane protein band 4.1 like 4B).

NR:

description
PREDICTED: band 4.1-like protein 4B isoform X1

GO: NA

KEGG:

id description
K21111 EPB41L4B, EHM2, LULU2; band 4.1-like protein 4B

RNA

RNA id representative length rna type GC content exon number start site end site
XM_022679669.1 True 3190 mRNA 0.52 23 7179416 7236401
XM_022679674.1 False 3188 mRNA 0.52 23 7179416 7236402
XM_022679678.1 False 3175 mRNA 0.52 23 7179416 7236401

Neighbor

gene id symbol gene type direction distance location
virma kiaa1429,LOC107706278,LOC107723452,LOC107595823,LOC107593674 coding downstream 40290 7112050 ~ 7139126 (-)
rad54b rad54b coding downstream 80055 7075803 ~ 7099361 (-)
fsbp fsbp,LOC107593680,LOC107723453,LOC107687811,LOC107595917,LOC105897825 coding downstream 85909 7089580 ~ 7093507 (-)
LOC103045397 gem coding downstream 113503 7057432 ~ 7065913 (-)
cdh17 NA coding downstream 132498 7017957 ~ 7046918 (-)
ptpn3 ptpn3,LOC108256378,LOC107687805,LOC107706310,LOC107595851,LOC107723490,LOC107657714,LOC107593679 coding upstream 2607 7239009 ~ 7285730 (-)
LOC103024076 NA coding upstream 102358 7338760 ~ 7368562 (-)
LOC103024588 LOC103024588,LOC108431074 coding upstream 137455 7373857 ~ 7379214 (-)
mrpl17 mrpl17,LOC107657704 coding upstream 597843 7834245 ~ 7839474 (-)
LOC103033961 LOC108431065 coding upstream 623622 7860024 ~ 7872013 (-)
G17117 esrp1,LOC107706288 non-coding downstream 23514 7148577 ~ 7155902 (-)
G17093 NA non-coding downstream 163572 7012003 ~ 7015844 (-)
G17086 pdp1,LOC107593682,LOC107706250,LOC107687812 non-coding downstream 178260 6996398 ~ 7001156 (-)
G16965 NA non-coding downstream 260759 6918196 ~ 6918657 (-)
G16962 NA non-coding downstream 279936 6899211 ~ 6899480 (-)
G17144 LOC108431076,LOC108256683 non-coding upstream 85097 7321499 ~ 7322308 (-)
G17134 NA non-coding upstream 133966 7370368 ~ 7372488 (-)
G17181 NA non-coding upstream 199974 7436376 ~ 7436620 (-)
G17187 NA non-coding upstream 274235 7510637 ~ 7511086 (-)
G17237 NA non-coding upstream 371552 7607954 ~ 7691689 (-)
sec61b sec61b,LOC102796100 other downstream 635141 6534859 ~ 6544275 (-)
LOC111191940 NA other downstream 816411 6354945 ~ 6363005 (-)
LOC103024654 NA other downstream 1069133 6105816 ~ 6110283 (-)
glipr2 glipr2,glipr2l,LOC107706057,LOC107689891 other downstream 1079072 6083120 ~ 6100344 (-)
G16709 NA other downstream 1478929 5697045 ~ 5700487 (-)
LOC103026934 ahrr,LOC108431062 other upstream 688527 7924929 ~ 8007620 (-)
LOC111188216 NA other upstream 1624732 8861134 ~ 8886317 (-)
G17638 NA other upstream 2326025 9562427 ~ 9562725 (-)
mak mak other upstream 2758743 9995145 ~ 10009151 (-)
G17792 NA other upstream 3010273 10246675 ~ 10247318 (-)

Expression


Co-expression Network