LOC103030214


Basic Information

Item Value
gene id LOC103030214
gene name NA
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035899.1
NCBI id CM008302.1
chromosome length 74127438
location 9311790 ~ 9482091 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_022680169.1
GGTGGCCTGCTGGAGGACAATTAACGAGATACTGAGTTTGACAACAGACAAgccctaaaataaaaagGTGGACGGCAAACGGATGTCGAGCAAACATTTAGCTTAGCACAATAGATCGATAAGAGGATATCCATGAAGGGGGACAACAAAAAAGGAGCATCCAGGAACCAGGATCAGAAGTTTGACTGAAGCGGAATGTTAAGGACATTGAATGAGGAAGACATAATGACCACTGGTCCCGCAGGTCAGTGGTCTCGGTGAAGAGATCTCACACTCTGAAACAATGGACAGATTTGGCAGTAAGTTGGAGCAGAAGGCTCTGAAGCAACCTAAGCAGAAGAAATCGAAGTCGGCTGAATTTCTGATGGAAAGGGAGGAGCAGGAAGAGGAaaacagggagaggagagtgATGAAGGGCATTGTAAATCCCGGGTTCCTgagcagagaggaggaggaggaggagaaggatgaGGCTGAGGAGCGcagtggtggaggtggtggtggtgggcagAGGAAGGAGGAGGGGAGAGAAATAGGAGGTGACAGGCAGGATAGCACCCTCGCCGCTCACCAACAACAAACGGAGCTGGAAGCCCCTGCCAATGCAAGAGGAAATGAAGGTGCCCGAAATTACTTTGACCCTTCGGCGGCGGCGCAGGGTGACCCAAGGCGGTGCAGGACGGCCGGGGTCGGAGCGGGAGATGAGCTGGAATTAAAATTCATGCACGAGGATGAGCGTGGTTTGTATGAGAAGCTGTCAAAGATGCTAAATGAAGATGATGCTTCAACCGTCATAGACTTGCCTGgcTGTGTAGTGGAGGAGAGGACAGTGGCTGGAGCTCCCAAGCTCCCCCTGGCTGAATGGAGGGATCGGTTGCGGGAGcagctggtggagaggagagaagaggttATCCCCCAGTATGTGGAACAGCTGAGAAAACGAGTACAGGATGACATGATCCCAGTGGGCAGGCCTTCCCTGGAACAGGATGAACGAGTAGAGCGAGGGATGAGGGAGGCGAGGAAACAGAGAGTGATGGCTGTCCTAAGAGGGAACACAAAGGCGTCCTCTCCCGTCGGTCATGTAGATCCGGAGGAGGCTGTTTTGCAAGAGCGGCTCTACTCTGCGTTCCAGCGggcAGAAAGACGCTTGCTGAATTCTCTGCATCGACGTCAGGCTGAAGTCATCGCCCAATATGGAGAAATCACTGAAGTCACGGTCAACAGTGAACCACTGGCCATCGAATCTGACCTCTCCTGGcaggTGGAGTGGGTGCGGACCCCTCGGCCGGTGGAGGTGCGTGTGGTGTGTTTGCGTGGGGTAAGAGAGAAGCTCTGCAGTGGTTTGTACAGTGTGAGCGTGTCCCTGCACAGTCGGCTGGGCGGCCCCGCGCTGCACTGGACCCAGCTGAAAGGGCAGCAGTGGAGCAGTACCACAGAACCTGTAGAGCACAAGGGCCGATTCTGCGACATCGACCTGCAGCTCAACCAGTCTGTCTGTGTGaCCTTACCTGCATCCTGTTACCTCCTGCCTTCCACAGTTTTGGTGTTCAGGCTATTGAGCATGTCCAGTGAGCAGAGTCCTGTAAGCGGTGTGGTGGCCTGGGGGGCGTTCCCAGTGTGTGACTGCTCTCTCACCCTCATCCAGGGCAGTTTCCGCACCCCTCTGCTCTGGGGTCGCCCCAACCCAGGTCTGGACCAATTCAGAAAAATGGAGCAGCTGCTGTCCGCTGACCTGGACAACTGGCTCTGCAACCTGTACTTCCAGGTGAGGATACTCCCGCGAGGTGTCCCACTGGTTCTGGAGTGCACTGTCCCCCCGCAGATTCCCCCTGGTCTCCAGCCGAGTTCCAGTGAAGGGACCCCTCCTGATGTGGCCGCCTCCGCCTGTTCCTCGTCTTCCCTGCCAGATAAATGTCCTCCTGTTAGAGCCCTCCCCGTTCCAGAGCCATCGTCAGATCAAGCCAAGCCTGGGTCACATGTCAAGGGCGGTAAACAGAGGGAGCCAATCAGCAAGATAACCAGCCCGAGTggctgcgagagagagagagagatagggacgAGCCTCACCGCAGAGCAGCTCCAGCACTTCTCCTTCTCCACACAGTCTGAGCGAGGTGCTCTGTGCGGGGCTGTGTGTTGTGGTCCGGCCGCACGTTTACGGATGGTGAGGCGCTTGCTCCCAGGAGAACTTGGCCTGTCCTGCTGTCCCCGGCCTCACTTCAGACAGCTCGCTCTCCTCCTCGTCCTGGTCATCCTCACCTGGTTTCCCCGCCTCTACCTGCACTACTGCAGCCAGTGGCTCTACCTCCACACTCGCAACATACCTGTCAACAGATTCCAGTTCCATGCCCACACAGTGGATCTGGTGTATCAGAGCTCTCTGCTGCGCACCCTGGAGGAGacgctgctggtgctgctggggCCCTTGACCTTGAACGCAGCTACGTTTTTGCTGCTTCTGATCAGATGGGTCTGTCAGCTAGCGTTTGGCTCAACGCCCTCCTTCCTGTCAAAGCTGATCATGGCTGTGGGAGCGTGGACAGTGCTGGACCCCTTGGCGGTCTTTGCTGTGGACGCGGTCCTGGGGCGTCTGTCCTACAGTGCAGAAACTCCAGTGGCTGATGCTGCCAAGCTTTACTGGCACTTCCATCGAACAGAACAGTCGGGTACAGTGGGCATCATCATCACACTCTTCCTCTACACAGTTCTATTCATCCTGTCCTTCACCGTGCTGTATGTGTACTTCTTCAGACTCCATAATGACGGCAGAATGCTCGATGTGTACCATCGCCTACACAGTCCAGAGGGAGTGTTTTTCATTCCACACGACCTGGAAGTGTCCAATCAGGAGCTCAGTTACATCGTAAAGAAGGCGGAGCAGTGGAGAGGCTTCAACGGAGAGAGGCGGAAGGTGGCAGTGTATGACTACATCTGGACTGAGGAGGAGCCTGCAGGGTCCGAATCCCCCGGGGGTCCGCCCAACGCAGCAGGAGAGGCCAGCACCCACGTGTCTGTCTACACCCTGTACCTGAGTGGCCTTCGTCGCCGCTACAGACACTTCCTCAGGCAGCCCAATGGAGCTATTGCAGAGGTGATCGGGGACTTGGACAGTGTGGAGGCTCAGCAGAGTGAGAGGATGGCACAGGAGGACGAGGTGGAGAGGATGAAGGGTCCAGCACATGCTGTCAGAGATAGAAAGAGGAAGAAGCATGCATGGCgatCTAACAGGGTGGGACCTGTTGGAGGAAGTGACACTGAGCCCAGTACAACACTGAAGGACCACAACCATTGACCCTACAGTTTAAATGTGCAGCTTTAATGCAGAGTAAAATAATGCTGGATTATTAGAATGTGGACAGAATTCTTCATTGTAAGAAGAGAACAAAGAACAGCAAGAGTACAAATGTGATGATCTCTTTAATACCAGTGTTTTTGGACACTACACTACTGAAGTTTTAGGCATATCTGTTCCTAATTAATATTtatcaattaatatattatgGTTACCCAGtgtacttggatttctgcataaattggtcattaaa
>XM_022680172.1
GGTGGCCTGCTGGAGGACAATTAACGAGATACTGAGTTTGACAACAGACAAgccctaaaataaaaagGTGGACGGCAAACGGATGTCGAGCAAACATTTAGCTTAGCACAATAGATCGATAAGAGGATATCCATGAAGGGGGACAACAAAAAAGGAGCATCCAGGAACCAGGATCAGAAGTTTGACTGAAGCGGAATGTTAAGGACATTGAATGAGGAAGACATAATGACCACTGGTCCCGCAGGTCAGTGGTCTCGGTGAAGAGATCTCACACTCTGAAACAATGGACAGATTTGGCAGTTTGGAGCAGAAGGCTCTGAAGCAACCTAAGCAGAAGAAATCGAAGTCGGCTGAATTTCTGATGGAAAGGGAGGAGCAGGAAGAGGAaaacagggagaggagagtgATGAAGGGCATTGTAAATCCCGGGTTCCTgagcagagaggaggaggaggaggagaaggatgaGGCTGAGGAGCGcagtggtggaggtggtggtggtgggcagAGGAAGGAGGAGGGGAGAGAAATAGGAGGTGACAGGCAGGATAGCACCCTCGCCGCTCACCAACAACAAACGGAGCTGGAAGCCCCTGCCAATGCAAGAGGAAATGAAGGTGCCCGAAATTACTTTGACCCTTCGGCGGCGGCGCAGGGTGACCCAAGGCGGTGCAGGACGGCCGGGGTCGGAGCGGGAGATGAGCTGGAATTAAAATTCATGCACGAGGATGAGCGTGGTTTGTATGAGAAGCTGTCAAAGATGCTAAATGAAGATGATGCTTCAACCGTCATAGACTTGCCTGgcTGTGTAGTGGAGGAGAGGACAGTGGCTGGAGCTCCCAAGCTCCCCCTGGCTGAATGGAGGGATCGGTTGCGGGAGcagctggtggagaggagagaagaggttATCCCCCAGTATGTGGAACAGCTGAGAAAACGAGTACAGGATGACATGATCCCAGTGGGCAGGCCTTCCCTGGAACAGGATGAACGAGTAGAGCGAGGGATGAGGGAGGCGAGGAAACAGAGAGTGATGGCTGTCCTAAGAGGGAACACAAAGGCGTCCTCTCCCGTCGGTCATGTAGATCCGGAGGAGGCTGTTTTGCAAGAGCGGCTCTACTCTGCGTTCCAGCGggcAGAAAGACGCTTGCTGAATTCTCTGCATCGACGTCAGGCTGAAGTCATCGCCCAATATGGAGAAATCACTGAAGTCACGGTCAACAGTGAACCACTGGCCATCGAATCTGACCTCTCCTGGcaggTGGAGTGGGTGCGGACCCCTCGGCCGGTGGAGGTGCGTGTGGTGTGTTTGCGTGGGGTAAGAGAGAAGCTCTGCAGTGGTTTGTACAGTGTGAGCGTGTCCCTGCACAGTCGGCTGGGCGGCCCCGCGCTGCACTGGACCCAGCTGAAAGGGCAGCAGTGGAGCAGTACCACAGAACCTGTAGAGCACAAGGGCCGATTCTGCGACATCGACCTGCAGCTCAACCAGTCTGTCTGTGTGaCCTTACCTGCATCCTGTTACCTCCTGCCTTCCACAGTTTTGGTGTTCAGGCTATTGAGCATGTCCAGTGAGCAGAGTCCTGTAAGCGGTGTGGTGGCCTGGGGGGCGTTCCCAGTGTGTGACTGCTCTCTCACCCTCATCCAGGGCAGTTTCCGCACCCCTCTGCTCTGGGGTCGCCCCAACCCAGGTCTGGACCAATTCAGAAAAATGGAGCAGCTGCTGTCCGCTGACCTGGACAACTGGCTCTGCAACCTGTACTTCCAGGTGAGGATACTCCCGCGAGGTGTCCCACTGGTTCTGGAGTGCACTGTCCCCCCGCAGATTCCCCCTGGTCTCCAGCCGAGTTCCAGTGAAGGGACCCCTCCTGATGTGGCCGCCTCCGCCTGTTCCTCGTCTTCCCTGCCAGATAAATGTCCTCCTGTTAGAGCCCTCCCCGTTCCAGAGCCATCGTCAGATCAAGCCAAGCCTGGGTCACATGTCAAGGGCGGTAAACAGAGGGAGCCAATCAGCAAGATAACCAGCCCGAGTggctgcgagagagagagagagatagggacgAGCCTCACCGCAGAGCAGCTCCAGCACTTCTCCTTCTCCACACAGTCTGAGCGAGGTGCTCTGTGCGGGGCTGTGTGTTGTGGTCCGGCCGCACGTTTACGGATGGTGAGGCGCTTGCTCCCAGGAGAACTTGGCCTGTCCTGCTGTCCCCGGCCTCACTTCAGACAGCTCGCTCTCCTCCTCGTCCTGGTCATCCTCACCTGGTTTCCCCGCCTCTACCTGCACTACTGCAGCCAGTGGCTCTACCTCCACACTCGCAACATACCTGTCAACAGATTCCAGTTCCATGCCCACACAGTGGATCTGGTGTATCAGAGCTCTCTGCTGCGCACCCTGGAGGAGacgctgctggtgctgctggggCCCTTGACCTTGAACGCAGCTACGTTTTTGCTGCTTCTGATCAGATGGGTCTGTCAGCTAGCGTTTGGCTCAACGCCCTCCTTCCTGTCAAAGCTGATCATGGCTGTGGGAGCGTGGACAGTGCTGGACCCCTTGGCGGTCTTTGCTGTGGACGCGGTCCTGGGGCGTCTGTCCTACAGTGCAGAAACTCCAGTGGCTGATGCTGCCAAGCTTTACTGGCACTTCCATCGAACAGAACAGTCGGGTACAGTGGGCATCATCATCACACTCTTCCTCTACACAGTTCTATTCATCCTGTCCTTCACCGTGCTGTATGTGTACTTCTTCAGACTCCATAATGACGGCAGAATGCTCGATGTGTACCATCGCCTACACAGTCCAGAGGGAGTGTTTTTCATTCCACACGACCTGGAAGTGTCCAATCAGGAGCTCAGTTACATCGTAAAGAAGGCGGAGCAGTGGAGAGGCTTCAACGGAGAGAGGCGGAAGGTGGCAGTGTATGACTACATCTGGACTGAGGAGGAGCCTGCAGGGTCCGAATCCCCCGGGGGTCCGCCCAACGCAGCAGGAGAGGCCAGCACCCACGTGTCTGTCTACACCCTGTACCTGAGTGGCCTTCGTCGCCGCTACAGACACTTCCTCAGGCAGCCCAATGGAGCTATTGCAGAGGTGATCGGGGACTTGGACAGTGTGGAGGCTCAGCAGAGTGAGAGGATGGCACAGGAGGACGAGGTGGAGAGGATGAAGGGTCCAGCACATGCTGTCAGAGATAGAAAGAGGAAGAAGCATGCATGGCgatCTAACAGGGTGGGACCTGTTGGAGGAAGTGACACTGAGCCCAGTACAACACTGAAGGACCACAACCATTGACCCTACAGTTTAAATGTGCAGCTTTAATGCAGAGTAAAATAATGCTGGATTATTAGAATGTGGACAGAATTCTTCATTGTAAGAAGAGAACAAAGAACAGCAAGAGTACAAATGTGATGATCTCTTTAATACCAGTGTTTTTGGACACTACACTACTGAAGTTTTAGGCATATCTGTTCCTAATTAATATTtatcaattaatatattatgGTTACCCAGtgtacttggatttctgcataaattggtcattaaa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_022680169.1 True 3548 mRNA 0.54 23 9311790 9482091
XM_022680172.1 False 3545 mRNA 0.54 23 9311790 9482091

Neighbor

gene id symbol gene type direction distance location
tfap2a tfap2a,LOC107664660,LOC107671378 coding upstream 179654 9119404 ~ 9132136 (+)
bmp6 bmp6 coding upstream 242859 9009246 ~ 9068931 (+)
LOC103046631 zgc:101569,LOC107678482,LOC107730011,LOC107557244 coding upstream 305960 8981004 ~ 9005830 (+)
LOC103021367 NA coding upstream 337752 8932684 ~ 8974038 (+)
LOC111191981 NA coding upstream 390059 8904081 ~ 8921731 (+)
slc35b3 slc35b3,LOC107730012,LOC107667423 coding downstream 338870 9820961 ~ 9836628 (+)
eef1e1 eef1e1,LOC107664672,LOC107572674,LOC107730010,LOC107678551 coding downstream 455670 9937761 ~ 9954129 (+)
LOC103024812 NA coding downstream 498515 9980606 ~ 9989518 (+)
tmem14c tmem14c,tm14c,tmem14ca,LOC107671380 coding downstream 509315 9991406 ~ 9995040 (+)
sycp2l NA coding downstream 598500 10080591 ~ 10101407 (+)
G17496 NA non-coding upstream 96284 9203389 ~ 9215506 (+)
G17474 txndc5,LOC107730007,LOC107557239,LOC107678545 non-coding upstream 227348 9082088 ~ 9084442 (+)
LOC111194882 NA non-coding upstream 237291 9073494 ~ 9074499 (+)
LOC111194870 NA non-coding upstream 380030 8928692 ~ 8931760 (+)
G17442 LOC108426561,LOC103358366,LOC104935909 non-coding upstream 434664 8872932 ~ 8877126 (+)
G17632 NA non-coding downstream 311 9482402 ~ 9482708 (+)
G17637 NA non-coding downstream 80337 9562428 ~ 9562725 (+)
G17643 NA non-coding downstream 104567 9586658 ~ 9586872 (+)
G17679 NA non-coding downstream 363923 9846014 ~ 9846301 (+)
G17685 NA non-coding downstream 405775 9887866 ~ 9888378 (+)
G17443 NA other upstream 361631 8916586 ~ 8950159 (+)
LOC111191978 NA other upstream 407786 8899940 ~ 8904004 (+)
LOC111191971 NA other upstream 412145 8891244 ~ 8899645 (+)
G17414 NA other upstream 595003 8675619 ~ 8716787 (+)
LOC103041197 NA other upstream 1126953 8168839 ~ 8184837 (+)
G17745 NA other downstream 799133 10281224 ~ 10281976 (+)
G17904 abr other downstream 1695817 11177908 ~ 11190080 (+)
G18332 LOC107710578 other downstream 3485472 12967563 ~ 12975106 (+)
G18386 gjd1a,LOC103027887,LOC108437049,LOC107700241,LOC107548473,LOC107746368 other downstream 3562740 13044831 ~ 13074453 (+)
LOC103028202 h3f3b,LOC105891059,LOC107572204,LOC105909691,LOC101073377,LOC105888650,LOC107388308 other downstream 3614619 13096710 ~ 13128508 (+)

Expression


Co-expression Network