CI01000010_00023093_00024037


Basic Information

Item Value
gene id CI01000010_00023093_00024037
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000010
NCBI id null
chromosome length 12265998
location 20332 ~ 24543 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000010_00023093_00024037.mRNA
CTATAAAAAAAGAAAATGAACAACAAATGAAGCCAAGACACTAAGCTGTAGTTTGAAGATTGTTTTTTTGTCTATGATAAACCTTTCAAAGTTGCCTAATTTATTTGCTGTTATGCAACTGATCAACTTAAACTGAAGGTGACCTTTATTTTATAGCATGACTATTATTCTGTAGAAGATATTTTGTAGAGAGGCAAGAAGTTTACACAATACAAAAATAGAAGTTCTTGAAGAGTCAAATTATTGTCTAACTAGGTTCACTTTGTTCTTTTCTTTGAGTTTATCTTTTTTTTTATTACTATAAGTATACCATCTGCATTTTGGCTTTCGCACCTGTTTTGGCTATTGAGACTGCAACAAACTTAATTTATTCTGGAGATTAAAAAGATGCTTTTTACTGAATCACATTACCCTGAATTGACTAAAGGACACAAAGCTCCAGAGCTATTTAAAATGTTATGATGGTCGACAACAATAAAACAACAATACTAAGTTGTTTTTATTTGGCATTCTAAACTATAGCAATGTTCTCTTGGCCAAAATACATTTAAAATATATACTAAATATATGTTAAAGAATATATATATTCTTTAAAGGAATAGTTTATCCAAAAATGAAATTTATACCATGATTTACTCACCCTCAAGCCATCCTAGGTGTATATGACTATCTTCTTTCAGATTAACACAATCAGAGATATATTTAAAAATATCCTTAGTCCTCCAAAGTTTATAATGGTTGTGAATGGGGGGCCACGTTTTGAAGCCAAAAATAATGCATCCATCTATAAAAAAAAAAAAAAGTAATCCATATGACTCCAGTGGGTTAATAAAGGCCTTCTGAAGCGAAGCGATGTGTTTTTGTAGGAAAAATGTCCATATTTAAAACTATAAATTCAAATAACTAGCTTCCGGCGGACGACCATACGCAGACTCCGGCGTATGGTCAAATGTGATTTATCTTCCTGTAGATGTTGCCAATTATTTTTGTATGTTTTGAAATATATTCAATTTATCGTTTTTTTTTTTTTTTTTTTTTTTTTTACATTTTTTTGGTCATTTTGGAAATTAATAGCTAAATGTCCCCTTGGTTGGTTGGCACCATTTTGAAATCATACCAAGATGCTCTACTCATTCTGCAATATATTGCTGACTAATGCTCATTAAGGATAATGCATGCATAGAAAAAAAAATCTTTCATGTAAATGGTAGAGCTGTGAAGTGGTCACATTTCCCAATACGGTCCTATCAGTCAGACCACCTGCTATGATATATGAGCCTAGATTTCTGTTCGTAATGGGGTTCAATGACACAGGAAAATGACTGCATGCAATATGGAGCATGTCTTGGATATGCCAAGTTACTTAAGGGGTCTTCGCTAATGTAGGCCACATCTCTCTTTTTTTTTTTTTTGGCTTTGTTGTTGTAATGTGAAGGACACAGGGGTGATTTTCTGCTGACAGACTGCCAACACTGCTAGAGAGGCTGGGAGAGTGAGGTTCGATGTCTACTAACCTTTCCCCTCATGGCCTTGCTCAGGTAGTAGTAATGTGACATTATTCTCTCCCCAGATCCTGCCTCAACTGAAACTGGGAAGCAATCCAGACCCCCTGGACAACTTCACTTCAGAGGCCCTGATCCAGCAGATCAGTGGGAACTGAGAACCGTGGAGAGCCACTAATGTCCTTCTGCCAGCCTGGCTTTAGTCACTTGGTTTCACACACACACACACACACACAGACACACACACAGACACACAGGTTTGTTTTACTATCTTAGTGAGGACATTCCATAGGCGTAATGGTTTTTATACTGTACAAACTGTACATTATATCCCCCTACACTACCCCTACTCCTAAACCTACACATCACAGAAAACTGTCTGCATTTTTACATTTTTGATAAAACATTTAGTATGTTTTTAAAGCTATTTTACTCATGAAATGTCCTCATAAAACATGTTTACGTCGTAATACCAGTGTAATACCCATGTCATTATACAAATTTGTGTCCTCATAAATCCTGAAAACAAGCACACACACACACACACACACACACACACACACACACACACACACACACACTTTCTGAATCTTATAGCTGACCATAGTTCTTTTCTATATGTAATTTATTAAAGGGGTTTCTGTCAATCTCATGTTAATCTTGAGTACCTATAGAGTAGTAGTGCATCCTTCATATCTCCGAAAAGTCTTTAGTTTTATCATATTTATGAAAGATACATACGCTGTACAGAGTCTATCCATCTGCAAGCTATCAATGGTCAGCTAAACAAATGTATTTAAACACACACAATGTTTTACTCAGTTTAAGCAGTTTTACTCACCACCTGCCCTTCCAACTCATGACCGGGATCATTATCACTGTGACCGCTCCATCTTTCAATTTCAAACGATCTGTAAATCCAGCGTAGAACTGGGCCTTGTTTATGAAACCATAAGCACCGATCCTGAGGGCTCGAGCTGCCACAGAAAAACATGAGATATTCTCCATTCATTTTAACCAGTTAAAAGTGATTGCAACTATCAGTTTCTATGGTTATTTTAATAACAAATATCGAGAGCGCATCAATGTAATGCGTGAGCACAAATCTCTTAGCTCCACTTAACACTGGGTTCTTTGGGAAGCAAGGTTATCTTTTCCTCACAACCAAAACATTAAATGTGGTCTCCGCGAATTTATTGTTAAACCAGCCAAAAGAATAAATTTTACATGGTTAATAAACCACTTCTCGCATCCTAAAGATGAGTTTGTCTAGCAGATATGCCAAATCTGGGACAAAACATGATCATTTGAGAGAGAGAGACGAAAGAAAACGGTCTCCAAGCCCCATCCAGACATGGGCTAGCACTGAGTTAGCCATTGCAGATCTGGTTGGTGGACTTAAACAACTACGAAAGAAAATCAGCAGGGTCACATTGAGAAGAAGGGCTCAGGTGCGAGACGTGATCAGACAACTCAAGAAGAAGGACATTACAGCACAAAGTTTCTACCCTGCACAACTGAAGATCAGCCTAAATACCGGTGACAAAACTTTGTCTACTTTAGCGGATGCCCTGCCAACACTACAGGAGCTAGGTATCAAGACGCAAATGGGGGAACGTGACGCATTGGAGATGGAGCTGTCAAAAGTCCTGTGGCAGACGCGGAGAGGAGGCCGCCGCCGGATTAATCAAGCAACACTGTCAGACACGGATGTTAGAGCTTTCTTCCCTGAGTAGATGACATAGCTAGCTATATTGTTTTTCATGAACAAATGCAAGCAAGATCTATAATTATTGCTTCTTTTCCCCTCCCCTTCGCCATGAAAGTGAGGTAAGAACTCATGGTTGTTAACGGGAGGGCTGTAATACAGACCGTATTGCGATTGACATTTATACTGTGACTACTTTAGGACTGGTAAATTTTGCTGGTTTTTTCAATAATGGTGGACATAAAACATTTAGCAAGTGGACGACACTCGCCCGTTGAGCTATTTTAACACTAAATCTGGGGCAACAAAAACAGTTTAAATACTGGAGACTAAATATCTCAATATTGAGCAACGAAACATACAAAAAGGAAATACAGAAGGAATGGGATAATTATATTAAAATGAATGATAATGGATCTGTATCTCCCTCTGTTGTGGGACGCAGCCAAAGCAGTAATAAGGGAAAAGATTATTGCACTTACATCCAGATTAAAAAAGCAAAGGGAACTTAAACAATTGGAAATAGAGAAAGAA

Function

NR:

description
putative transposase element L1Md-A101/L1Md-A102/L1Md-A2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000010_00023093_00024037.mRNA True 3744 mRNA 0.38 2 20332 24543

Neighbor

gene id symbol gene type direction distance location
CI01000010_00322969_00326216 DFFB coding downstream 298426 322969 ~ 327175 (+)
CI01000010_00332125_00333333 B3GNT7L coding downstream 307582 332125 ~ 333470 (+)
CI01000010_00357915_00361980 LRRC47 coding downstream 333372 357915 ~ 362086 (+)
CI01000010_00367694_00371294 MAD2L2, MAD2L2.S coding downstream 341643 366186 ~ 371422 (+)
CI01000010_00379332_00382116 NA coding downstream 354789 379332 ~ 382311 (+)
G60562 NA non-coding downstream 79368 103911 ~ 104164 (+)
G60594 NA non-coding downstream 96981 121524 ~ 121725 (+)
G60622 NA non-coding downstream 160284 184827 ~ 192241 (+)
G60665 NA non-coding downstream 269981 294524 ~ 294762 (+)
G60700 NA non-coding downstream 271311 295854 ~ 296063 (+)
CI01000010_00826648_00831638 NA other downstream 796481 826648 ~ 832705 (+)
CI01000010_00881905_00883563 NA other downstream 841271 881195 ~ 883684 (+)
CI01000010_00946586_00947327 NA other downstream 920639 945182 ~ 947577 (+)
CI01000010_03197380_03199958 NA other downstream 3169612 3197380 ~ 3200044 (+)
CI01000010_03320340_03346243 NA other downstream 3289152 3313695 ~ 3347796 (+)

Expression


Co-expression Network