LOC103031565


Basic Information

Item Value
gene id LOC103031565
gene name NA
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035899.1
NCBI id CM008302.1
chromosome length 74127438
location 39755477 ~ 39756680 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_022685486.1
AACTGTTGGATTTCAGAATGAATTCCAGCCAAACTAATATTGTGGATATTACTCCTCTCTGCTATGAATTTGTAAATGGATCTTGTCCAAAGTTTGTCTATCCTGCACTTTTGAGGGTTTctctttatttgttctttacTGCAGTGGTGACTTTAACAGTGTTTGGAAACCTTTTTGTCATCGTAACCATTGTTCATTTTAAGCAGCTGCACATGCCGACTAATTACCTTGTTTTGTCTCTGGCTGTGACTGATCTGCTGCTAGGTGGTGTTGTGATGCCTCCCTTCATGGTACAGTGTATTGATAATTGTTGGTATTTGGGCCCTGTATTATGCAAAGTATACAACAGTATTGCTATCATGGTGTGCACTGCTTCTATTTTAAATTTGTCGTTTATATCTATTGACAGATACTGTGCTGTATGCCATCCTCTGCAATATCAAACTAAAATCACCCCCTTTGTTACAGGAATAATGATTTTTATCTGCTGGATTGTCTCAGCGGCAGTTGGTTTTGTAATAATATTTCTGGAAATTAACCTTATAGGCGCTGAAGACTTTTACTATGAGCATGTTGCATGTGAAGGAGGTTGTGTGGTGTTTCAAAGCACAACGTCAAGCACGTCTTCCTCTTTGGTTTCCTTCTACATCCCAGGAGTTGTAATGCTCagtatatatatgaaaatattccATGTTGCTCAAAAGCAAGCAAAGTCTATTCAGGactcaaaatgtaaaaacagtacacaatcaattataaaaaaagaggagaaaaaagccACCAAAACCCTGGCAACTATTTTAGGGGTTTTCCTTTCACTTTGGATGCCGTTTTTCATCTGTAATGTAATGAATCCTTATATTGGTTATGCAATCCCTCCAGGACTGTTTTATACTCTTGCATGGATTGGATATATGAATTCAACAGTCAACCCTATTGTGTATGCTTTTTTCTATGCATGGTTTAGAAAAGCATTCAGGATGGTTTTATCAGGGAAAATATTTCAGCCAGGGTCTTCAAGAACaaatttgttttcacactgaaaaatatttacCCCATGACAAATGTCTGTTAAAATGATCACAAAAAAGATGATAGGTACTGAACTAAAACCACTGATAATAACTTGATAGTAAATGTATGTAGAGACAGTAAATACATATATGTAGAGACAAATAAAGAAGTATTTTGAACTTTCCTAAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_022685486.1 True 1204 mRNA 0.36 1 39755477 39756680

Neighbor

gene id symbol gene type direction distance location
LOC103035909 NA coding downstream 3487 39750022 ~ 39751990 (-)
LOC111191823 NA coding downstream 20509 39733847 ~ 39734968 (-)
LOC111191820 NA coding downstream 26892 39727514 ~ 39728585 (-)
LOC111194344 NA coding downstream 34755 39718689 ~ 39720722 (-)
LOC103035599 LOC103035599 coding downstream 49633 39704128 ~ 39705844 (-)
LOC103031261 NA coding upstream 8775 39765455 ~ 39766663 (-)
LOC103036329 NA coding upstream 17922 39774602 ~ 39777033 (-)
LOC111196293 NA coding upstream 37036 39793716 ~ 39795025 (-)
LOC103034967 LOC103034967 coding upstream 39718 39796398 ~ 39798840 (-)
LOC111196295 NA coding upstream 58837 39815517 ~ 39816850 (-)
G24964 NA non-coding downstream 22998 39724455 ~ 39732479 (-)
LOC111196215 NA non-coding downstream 231203 39514469 ~ 39524274 (-)
G24911 NA non-coding downstream 256011 39499043 ~ 39499466 (-)
LOC111196213 NA non-coding downstream 275133 39472824 ~ 39480344 (-)
LOC111191798 NA non-coding downstream 546212 39207480 ~ 39209265 (-)
G24992 NA non-coding upstream 62596 39819276 ~ 39825981 (-)
G24997 NA non-coding upstream 88693 39845373 ~ 39848209 (-)
G25128 NA non-coding upstream 626921 40383601 ~ 40421173 (-)
G25174 NA non-coding upstream 969119 40725799 ~ 40726362 (-)
G25173 NA non-coding upstream 969805 40726485 ~ 40728663 (-)
G24903 NA other downstream 297288 39455236 ~ 39458189 (-)
LOC103043888 LOC108432835 other downstream 408561 39273635 ~ 39346916 (-)
batf batf,LOC107697118 other downstream 430775 39309726 ~ 39324702 (-)
smim8 smim8 other downstream 828484 38925623 ~ 38926993 (-)
LOC103024598 LOC108411439 other downstream 832560 38887626 ~ 38922917 (-)
LOC111196341 NA other upstream 418582 40175262 ~ 40230868 (-)
G25265 slco5a1 other upstream 1457741 41214421 ~ 41218829 (-)
arhgap11a NA other upstream 1679361 41436041 ~ 41442494 (-)
LOC111196508 NA other upstream 2099415 41856095 ~ 41865844 (-)
LOC111196586 LOC108262118 other upstream 2112344 41869024 ~ 41880424 (-)

Expression


Co-expression Network