CI01000010_00393562_00396269


Basic Information

Item Value
gene id CI01000010_00393562_00396269
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000010
NCBI id null
chromosome length 12265998
location 393051 ~ 396269 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000010_00393562_00396269.mRNA
TTATATAATCCACATTTAGACTTCAAATTCTTGGTTAGTGGTTCCTGACCATGTTCCAGGAAGCTCCCCAAAAGTACATATTTTGGTGGTGGATATTCAGGTCAATTTGATTTTGGCTTGTGAACATCCATAAGTTGTTCAACAGAACATGGTGACATTTACAGGATGAGCAGAGCTGCATTAATACATTTTCATGCAGTCACAGAAAATAAGCATAAAGTACAATATCAGTCAATACTGAGACTGATCAAAACAAGATCATGATTATTTTCCTTACTACAGATTATTGATTTTTGATTATTTTTTATTATTTTTTAAGTTTTTATTATTTTTAAGTTTACAGAAATATACAGACATATAATTAATACAGCTCATACAAAAGTAGCTGCTGTTTTTTTGTTTTTGTTTTTTTTTGCATAGGACATAAACAGGTATAAACAGTGAATGTGTTGGTACAATTACTTTCAAGGAAAGCGAGAACACAAGCACAACATGTGAATCATGCCTTGAGATGACCTACACTGACATTCCCAATGGATTGACCAAATGTTTGCCATGTTCAGTCTGTGATAAAAGTATTGGGCTGAGAGTAAAGCAGACATGTACATCGATATCAAATACAGTGTGTGAACCTCTGCCAGGTTATTACTGTATAGACCTGCACTCAAACTGTCAAAAGACCAAAAAACATTCAACCTGCTCACCTGGACAATACGTCAACCAAACCGGAACAGAATTTAGTGATACAGTGTGTGATCACTGTCCTGCTGGTTCATATTCAAATGGTACAGTCTGCAAATTGCATACAAACTCAGAGACTCTGCTGTCCCATGTGGAGCAGCTGCTGAGAGCAGTGATCCTAAAAATCAGTGTGTGTGACGCTGTTCTAGACAACAATCCTCCAGGGTATACATTCACAGTGCTGGTACACACTAGGGAAGCCGCCACAAGAAACATGGAGAAAGTTCAG

Function

NR:

description
Zgc:153759 protein, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000010_00393562_00396269.mRNA True 970 mRNA 0.37 5 393051 396269

Neighbor

gene id symbol gene type direction distance location
CI01000010_00388349_00390056 NA coding upstream 2995 388349 ~ 390056 (+)
CI01000010_00379332_00382116 NA coding upstream 10740 379332 ~ 382311 (+)
CI01000010_00367694_00371294 MAD2L2, MAD2L2.S coding upstream 21629 366186 ~ 371422 (+)
CI01000010_00357915_00361980 LRRC47 coding upstream 30965 357915 ~ 362086 (+)
CI01000010_00332125_00333333 B3GNT7L coding upstream 59581 332125 ~ 333470 (+)
CI01000010_00445263_00455343 NA coding downstream 48994 445263 ~ 455362 (+)
CI01000010_00473858_00478160 NA coding downstream 77190 473459 ~ 478422 (+)
CI01000010_00491341_00497973 NA coding downstream 95028 491297 ~ 498199 (+)
CI01000010_00504866_00514962 NA coding downstream 108597 504866 ~ 515974 (+)
CI01000010_00529313_00531098 NA coding downstream 133044 529313 ~ 531228 (+)
G60707 NA non-coding upstream 86659 306189 ~ 306392 (+)
G60706 NA non-coding upstream 88951 303848 ~ 304100 (+)
G60705 NA non-coding upstream 91799 300570 ~ 301252 (+)
G60700 NA non-coding upstream 96988 295854 ~ 296063 (+)
G60665 NA non-coding upstream 98289 294524 ~ 294762 (+)
G60667 NA non-coding downstream 145549 541818 ~ 551336 (+)
G60745 NA non-coding downstream 171334 567603 ~ 567932 (+)
G60693 NA non-coding downstream 200555 596824 ~ 597095 (+)
G60780 NA non-coding downstream 276797 673066 ~ 678107 (+)
G60801 NA non-coding downstream 331568 727837 ~ 736009 (+)
CI01000010_00826648_00831638 NA other downstream 424755 826648 ~ 832705 (+)
CI01000010_00881905_00883563 NA other downstream 469545 881195 ~ 883684 (+)
CI01000010_00946586_00947327 NA other downstream 548913 945182 ~ 947577 (+)
CI01000010_03197380_03199958 NA other downstream 2797886 3197380 ~ 3200044 (+)
CI01000010_03320340_03346243 NA other downstream 2917426 3313695 ~ 3347796 (+)

Expression


Co-expression Network