LOC103046753 (chrm5)


Basic Information

Item Value
gene id LOC103046753
gene name chrm5
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035899.1
NCBI id CM008302.1
chromosome length 74127438
location 41251560 ~ 41263819 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_022685674.1
tatgagccggcactcagagggagcacaactgGTCCTGCTCCCTTCGGGTGGGTACATCGCGCTTAATCACGCTTAAAGGTGGCGCCTGGTGGCACGaagtgtctgtgagctgatgcatcGGAACATAACCGCTGTGCTTTACTGCTTTAACtactcaggcaatgattcatcagcagcagctccaaaaaaaggggtgattgacttcacaagtgtcggaggaggcgtgtgctcgtccacaTCCTCCTAGGGTCACAGGTGCCACTGGTAATGGggcgcacaaaggggtgggacaaatggataaccaaattgggagaaaatgggggaaaaaatcagaaataaattattttttaaaaaaatgtatcatgtTTTAGCGATATTGTGATATCCAACATAGATATGAAATTTCATTTGTATTGTGCGCTACTACATGGtattaaaaaacaatcaaaagttATCAGTCCATCCCTAGCGTACACACCTCTCAACCTATCAGTTCTCCACCCCTTCAGTCTGTTCTGTCTTTTCTTATCTCCTCTTTTCTCCAACCCAGTTCAGTAACTGCATGTTCACTGTCCCAAATCATGACGAACAGCCCAGCCCCCGTGGGAATGACCTCCTCCCTGCCAGTCAGAGCTACATCTGTGTATAGCAgcgcagccacacacacaaatgcacagcagcagcaggagcagctgAGCAcctcatcatcgtcatcatcatcttctACTGCCAAGGAGCATCTGCGTCTGCTGAGAGCACATCACCTTTGTTCTTCATCACCATGAAGTTAAGGCACCACGATGCCTACTGCCTCAGCACACCAAAAAAGCAGCTCTGCCATGAGGATTAAAGCAGTGAAGTGTGGTCAGGATCTCCACCTGGAAGAAAAGGCGGTTTTGGTGGACTCTGCGAACTGAAGAGTGTGATGAAGAAGACCAGCTGGAGTGTCCTCATCACCACAGCGATGAATAGACTGGCTGATAGGGGTCATGAGTGGACAGTGATAACACTCAACATGAAGCACAGAGAGGACTACTCAACAGATGTTTGCTTTCAGTAGGACTTCACTCACAGGATGGAGGAGGATACATTTCACAATTCCACTGCAAGTGGAAACGCATCAGCTGTCCAGAACATTCCACATGATCTTTGGGAGGTTATTACTATTGCTACTGTTTCAGCAGTCGTAAGCCTGATCACAATAGTGGGGAACATTCTAGTGATGCTCTCGTTCAAGGTTAACAGCCAGCTGAAGACAGTCAACAACTACTACTTACTCAGTCTGGCTTTTGCAGACCTCATTATCGGAGTGTTCTCCATGAACCTTTACACGTCTTATATTGTGATGGGATACTGGGCTCTGGGAAACTTAGCATGTGATCTGTGGTTAGCGCTGGACTATGTGGCAAGCAATGCATCAGTAATGAATCTGCTGGTGATAAGCTTTGATAGGTATTTCTCCATCACAAGACCTCTTACCTATAGGGCTAAAAGAACACCCAAACGAGCAGGCATCATGATAGGCATGGCGTGGCTGGTGTCCTTTGTCTTGTGGGCCCCTCCAATTATATGTTGGCAGTATTTTGTGGGGGAGAGAACAGTTCCTCCTGACCAGTGCCAGATTCAGTTCTTCTCAGAACCTGTGATCACGTTTGGTACAGCTATAGCAGCATTTTACATTCCTGTCTCTGTTATGACCATTTTGTACTGCAGGATCTACAAAGAGACTGAGAAGCGAACAAAAGACTTAGCTGAGCTGCAGGGCCTCACTTCTGTGGACAAATACGAAAACTCAAAAGCACAAAAGCAAAGATCTTGCTTTGGCTTCAACACTGATGGACATACCACACAGGCCTCATGGTCTTCATCCAATCAGAGCAATGTAACCAAGACTACAACACAGTCTGATGACATGTGGGTAAAGTCAGAGCAGGCCAACACACTCAACAGCTACACATCATCTGAGGACGAAGAGCGGCCTGCTTCTGAAGCAACGTCTCAAGGATCCTACAGAAACCAGGAGCCGGAACCAAATGAGCTGTTGGCTTGTTATGAGGAAAGTCACTATTTCACTAATTCTATTAAGTACTGTTCCCAAAAGAACCATAAGAAATGCATCTCCTACAAGTTTAAGCCAGCTCTGACCAACATCAATCCTCATAAAACCAACACAGAGTCAGAAAGGAAAACATCACATGCTTGTTCTTCTTCAGAACAGCTGGCCCTTTCATCAACCTCCTCTTCCAACAAGCCCATGGATCCCAACCTGAAGAGTCAGATCACCAAACGGAAGAGAATGGTTCTCATCAAGGAGAAAAAAGCAGCTCAGACCCTGAGCGCCATCCTGCTGGCCTTCATCCTTACTTGGACTCCGTATAATATCATGGTGCTCATTTCCACCTTCTGCTCTGACTGCATCCCCCTGTCCCTCTGGCACTTGGGCTACTGGCTTTGCTACGTCAACAGCACCATCAATCCTATGTGCTACGCCTTGTGCAACAAGACCTTTCAGAAGACCTTTCGAATGTTACTCCTCTGCAAGTGGAAGAAGAAGCATGGAGAAGAGAAGCTGCCCTGGTCTGCTCAAAATCCAGTAATGACCAGCAAGCTGACCTAGCAGCCAGAGGAAATCACATGAAGTGCCAGCCACGTACAGTAAATGTAACAGCTTTCCAGATATGTGTACTTTATTTGTAGTAAAACTTAAGCTGTTGTGTAAATAGTCTTTAAACTGCATGTGAAACAAACTGCAAGGGCTTGTAAACTAATGTTTACATGATCACATGACAATTTGATTTTACTAGGTTTAAGCATAGAATGAGAAAATGCATAAATGTATTATCTTTTGAAATGAAGTTCTTTTAAATTTTGTGGCAGATCCAAAAATAAGAGATAAAACCAAAGCATgactgaatatacagctctggaaaaaaataagagaccactatagtttctggatcagttt

Function

symbol description
chrm5 Predicted to enable G protein-coupled acetylcholine receptor activity and G protein-coupled serotonin receptor activity. Predicted to be involved in G protein-coupled receptor signaling pathway, coupled to cyclic nucleotide second messenger; adenylate cyclase-inhibiting G protein-coupled acetylcholine receptor signaling pathway; and chemical synaptic transmission. Predicted to act upstream of or within dopamine transport and transmission of nerve impulse. Predicted to be located in plasma membrane. Predicted to be active in dendrite and synapse. Predicted to be integral component of plasma membrane.

NR:

description
PREDICTED: muscarinic acetylcholine receptor M5

GO: NA

KEGG:

id description
K04133 CHRM5; muscarinic acetylcholine receptor M5

RNA

RNA id representative length rna type GC content exon number start site end site
XM_022685674.1 True 2965 mRNA 0.45 2 41251560 41263819

Neighbor

gene id symbol gene type direction distance location
cpa6 cpa6,LOC107695399,LOC107686690 coding downstream 769017 40428985 ~ 40482543 (-)
arfgef1 arfgef1,LOC107595140,LOC107686689 coding downstream 892941 40319929 ~ 40358619 (-)
LOC111191900 eif4g3 coding downstream 942072 40307931 ~ 40309488 (-)
ptprk ptprk,LOC106607755,LOC106571353 coding downstream 1138937 40020492 ~ 40112623 (-)
themis themis coding downstream 1234466 39994584 ~ 40017094 (-)
ryr3 ryr3 coding upstream 16048 41279867 ~ 41391804 (-)
LOC103044553 grem1 coding upstream 164364 41428183 ~ 41431907 (-)
scg5 scg5,LOC107756590,LOC107549096 coding upstream 168175 41431994 ~ 41435223 (-)
LOC111196450 actc1a,act2,zgc:86709,LOC105024319,LOC100534413,LOC102689871 coding upstream 180197 41444016 ~ 41446465 (-)
LOC103042935 actc1a,act2,zgc:86709,LOC105024319,LOC100534413,LOC102689871 coding upstream 183581 41447400 ~ 41451372 (-)
G25272 emc7,LOC107549094,LOC107671783,LOC107756596,LOC107721381,LOC107601948 non-coding downstream 1907 41244692 ~ 41249653 (-)
G25268 katnbl1 non-coding downstream 9189 41239669 ~ 41242371 (-)
G25255 NA non-coding downstream 28073 41222119 ~ 41223487 (-)
G25258 NA non-coding downstream 96759 41154267 ~ 41154801 (-)
G25173 NA non-coding downstream 522897 40726485 ~ 40728663 (-)
LOC111196423 NA non-coding upstream 138202 41402021 ~ 41402694 (-)
G25381 NA non-coding upstream 140191 41404010 ~ 41406787 (-)
G25367 ywhaq,LOC107721301,LOC107549101,LOC107756586,LOC107668239 non-coding upstream 270100 41533919 ~ 41545501 (-)
G25400 NA non-coding upstream 274364 41538183 ~ 41539618 (-)
G25473 NA non-coding upstream 453402 41717221 ~ 41717780 (-)
G25265 slco5a1 other downstream 32731 41214421 ~ 41218829 (-)
LOC111196341 NA other downstream 1020692 40175262 ~ 40230868 (-)
G24903 NA other downstream 1793371 39455236 ~ 39458189 (-)
LOC103043888 LOC108432835 other downstream 1904644 39273635 ~ 39346916 (-)
batf batf,LOC107697118 other downstream 1926858 39309726 ~ 39324702 (-)
arhgap11a NA other upstream 172222 41436041 ~ 41442494 (-)
LOC111196508 NA other upstream 592276 41856095 ~ 41865844 (-)
LOC111196586 LOC108262118 other upstream 605205 41869024 ~ 41880424 (-)
G25678 NA other upstream 1453847 42717666 ~ 42718389 (-)
G25785 NA other upstream 1835003 43098822 ~ 43111401 (-)

Expression


Co-expression Network