LOC103044553 (grem1)


Basic Information

Item Value
gene id LOC103044553
gene name grem1
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035899.1
NCBI id CM008302.1
chromosome length 74127438
location 41428183 ~ 41431907 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_022685712.1
CATACTGCTCAGATTTCAACTActggtatttattttatttagtctaCTTTCCAATAACTTAAAAGTTTCCAGACACATTTATTCTGCCCCGATTAATGCTTAGCAGCACAATGGCATAACTCACAAACAATGCATTTTCTTACAGTTTCAGACAGTACAGTTTATAATGCAATGAGCTACAGTTCCCCATAGAAGAACGACATTCTGAAAACCACTTCCTTCAGTTTCAGTGTGTTGGGAAATTTAGCCACAAAAATGATCACTTTAAAACCCTGAAATCCCCCTATGATTTGATGTTATGAGTTGGAGGCGTGGTAGTCTGCCATCATCCTGCCCATTCACTTAAATGTTGGGAGGATgtcccacaccacacacacttctgtcAGTCTGGTCTGGTCTCTGTCTCGAGCTCTGGATTTTGAAAGGATTAGCCTGTCTTTCAGTTCATGTGAGCTGATCAAGCCATCATATTACAGTTTATCTGGGATTCCACTCCAAGACATTCAGAAGGTAAGATAATGGTTATAATTTGCTTTTGGAGAGAATAGCTGTATGTATCTCATTTTGGAGAATGCCacagctttttattttactcatgaAGGGCAGCTTTCTGCCTTATTAAGAGTGAATCATTAGAACTGATGCCTAAAATTGCTAAATGATGATACTGAACATAATgcaaagtgaatgagtgagataGCTGCAAAGTAAAGTCCACTTTCTTTATGACTGATGTTACAGCTTCTgttgtgcaaaaaaaactatatacatatattttttatgatgtgaaaacttttttttaggatGCAATATTTTGGTGATTGAAAAAATGCTCCAAagccactttaaataaaatatttttacattgacttccatgaAAGTTAATACGTTTAATTCTTCTCCTATTAAGATTTTTGAAATTTAAGATTTCGGTGTGTCAGTGACGAtgtacataaattaaaacataaaaattatgtTAATGTAATGAACCGTTAAATGGTCTGGAAACATTATCTTGTAGTAAGACTAAAAACACCATATtagattataatattattatattatgacaTTAGCTTGTTCTACACTTTTCTCTCACACTGAGAGCTTGAGGAAACCTTTTGGAAATTTTACTGGAATGTTAGATTACACAcatggaaaacaaaacaataggGCAAAATGTATTTGTTCTAATGAAACCATAACTGTTATGTTTTATAGTTCCCACTttccaataaaaatgtttatgaaATAGTATTGTAGTCCCTGAGTCTTAAGATCATTAGTGGTATTAAGAAAATGCACATTAAGACCATAAATGAGCAGTCTTGATCTCAAAACCTGTTTTAAGACCATAAGTGAGCAGTATTGGTCTTGAGAGCAGTCTTAGGATCATAAGTGACAAGTTTTGGACTCAAAGCCAATCTTAAGACCATAAACAAGCGATCTTGGTCTCAAGACCAGTCTTGAGAAAATGCACAAGCACGTTCTTGGTTTCAAGACTAGCCTTAAGAGCATAATCAAGCAATCTTGGTCTCAAAGCCAATCTTAAGACCATCAACAGACAACCTTGCTCTCGAGACCAGCCTCAACAGTGAGTGAGTTTGGTCTCAAGACCAGTCTTATGACTATAAATGAGGGGTCTTGGTCTCCAGACCAGTCTAAAGACTATAAATGAGCAATCCTTGTCTCAAAGCCAACCTTAAGACTATAAACAAGTGATTTTGTTCTCGAAACCAGCTTTAAGACCATAAGTGAGCGGTTTTGGTCCCGAGACCAGTCTTAAGACTATAAACAAGCTGTCTTGGTCTTGAGACTAGTCTTAAGACCATAAATAAATCTTGATCTCGTCTTGGCCGGACTTCTTTTAGAATTGGTCTTGCCTTGGAATTGGTCTTGTCTTGAGGCAATTTTACTTAGAAACAAAACTTttgttaatgttattttgtCCTGTAGAAAATGATTAGTAATATATATGTCatgtataataaattataattaatgtgCAATGACTTATACACTCTTATTTCTGTTTGTccaatttctttttgttatgtttATATGATGTAAAAATCCTATTCTAGTCTTAATCTTGTATAATTCTCGGTCTCAGTCTTTACTTAGACTTGATTACTAAAAGGCTTGGACTTGACTGGGCTCAGTTTTGACCACAACAATATAGGTAAATAGAAAGTTGTCATAACGTTGTGTTCCCCAAAAACAGCCACAGGAGAACTGAAACGTTCAGTGTTGGCTAAGTATCATGATTAAAATgctatagtaatagtaataattattattatgaatttgttgatttttttttttctctcctcttatCAGTCATGGCTGGCGGAGCTCCGGCTGTTCTGGCGGTGGTGTATCTGCTCTTCGCTCCGCTGAGGTGTGTCGTCTCTTCGGGTTTCCACGGCGCTTTCCCGCACCCCAACAAGCCCCCGGTGCCCGGCTGGGGGCAGCAGAGcgcgagcagcagcagcagcagcggtcAGTCCGTGGAGGAGCCGCTGGACTCGAGCCAGGAGGCGCTGCACGTGACGGAGCGCCACTACCTGAAGCGCGACTGGTGTAAGACGCAGCCGCTGAAGCAGGCGCTGCGCGAGGAGGGCTGCCTCACGCGATACATCATCAACAGCTTCTGCTACGGACAGTGCAACTCCTTCTACATCCCGCGACACCTGCACCAGGGCGACGGAGCCTTCCAGTCCTGCTCCTTCTGCAAGCCCAAGAGCTTTACCGCGGTCTCCTACACGCTGCAGTGCCCGGGACAGATCCCCCGCCTCAGGAGAAAGCGCGTGCTCCGCGTCAAACAGTGCCGGTGCACCTCCATAGACCTGGACTGAGGAGAGCGCAGTGGAAGAAAGACTGCCTGTAAAACTGCCTTCAGCACAGACTCTGTACAACAGCGCCTCCACAGGACACACGCGCTTCAGCACACCCTTCACTCTCCACAACACAGGTTTTATATCTTATCAGAGGTGTTACCTAGTTTTATACAGGCGTTTTCTTATTCTGGTGTACACCGGTCAAGCATATCAAAATAACCACCTCCTTGCTTCTACACCTATTATCCATTTTTCAGCTTGACTAAGTATATAGCAGTTCTACAGTTCTATAACTCTAAAGAATGTAGAGTTGTGTTCGGAATGGTTCACTCATTAAAGGAGTAGTTAAATATGATTACGAGTAAAAAGTCAAACCcccattcacccccagcattccaaaatacagcacttttatccGACGCTCCCAACAGACTTAGAATGCTAGTGATAGAGGCTAACATtgtccatgcaaagaaatcacttttttttttcttttttttttttttacaaaaaagacttcccaagtctcccATGAGTGcaggtgggctatttgacaaaagtttgtactcattatcatgtaaCACTACACCCCATGTCCAATTTACACcaaatatttgctatatattgaAATAAGTAGGGGATGACCAAACAACAAACCATCTTGTTTGTGCCGCTCTAAGGACATCTGACACATCAGCACTGCATTATGGTATACATTAAAAATTGTAGCATACCTCATCGGTACACTGTATGGGGACTTAAATGTACTGCTGAGatttcaaacagcacaacaaaTTGGCTGACGCACCATATAGTGCACTGTTTCTGTAAAAGGGGGCGATTCTGAACACAGCTCAGGAGTGTGAACAGTAAGTGAactcgttaaaa

Function

symbol description
grem1 Enables BMP binding activity and protein homodimerization activity. Involved in several processes, including negative regulation of cell differentiation; negative regulation of cell population proliferation; and negative regulation of signal transduction. Colocalizes with collagen-containing extracellular matrix.

NR:

description
PREDICTED: gremlin-1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_022685712.1 True 3725 mRNA 0.40 1 41428183 41431907

Neighbor

gene id symbol gene type direction distance location
ryr3 ryr3 coding downstream 36379 41279867 ~ 41391804 (-)
LOC103046753 chrm5 coding downstream 164364 41251560 ~ 41263819 (-)
cpa6 cpa6,LOC107695399,LOC107686690 coding downstream 945640 40428985 ~ 40482543 (-)
arfgef1 arfgef1,LOC107595140,LOC107686689 coding downstream 1069564 40319929 ~ 40358619 (-)
LOC111191900 eif4g3 coding downstream 1118695 40307931 ~ 40309488 (-)
scg5 scg5,LOC107756590,LOC107549096 coding upstream 87 41431994 ~ 41435223 (-)
LOC111196450 actc1a,act2,zgc:86709,LOC105024319,LOC100534413,LOC102689871 coding upstream 12109 41444016 ~ 41446465 (-)
LOC103042935 actc1a,act2,zgc:86709,LOC105024319,LOC100534413,LOC102689871 coding upstream 15493 41447400 ~ 41451372 (-)
rrm2 rrm2,LOC107668265 coding upstream 27701 41459608 ~ 41465701 (-)
klf11 klf11,LOC108410427 coding upstream 37462 41469369 ~ 41473751 (-)
G25381 NA non-coding downstream 21396 41404010 ~ 41406787 (-)
LOC111196423 NA non-coding downstream 25489 41402021 ~ 41402694 (-)
G25272 emc7,LOC107549094,LOC107671783,LOC107756596,LOC107721381,LOC107601948 non-coding downstream 178530 41244692 ~ 41249653 (-)
G25268 katnbl1 non-coding downstream 185812 41239669 ~ 41242371 (-)
G25255 NA non-coding downstream 204696 41222119 ~ 41223487 (-)
G25367 ywhaq,LOC107721301,LOC107549101,LOC107756586,LOC107668239 non-coding upstream 102012 41533919 ~ 41545501 (-)
G25400 NA non-coding upstream 106276 41538183 ~ 41539618 (-)
G25473 NA non-coding upstream 285314 41717221 ~ 41717780 (-)
G25472 kidins220b,LOC103040274,LOC108258057 non-coding upstream 287745 41719652 ~ 41729250 (-)
G25474 NA non-coding upstream 297924 41729831 ~ 41730469 (-)
G25265 slco5a1 other downstream 209354 41214421 ~ 41218829 (-)
LOC111196341 NA other downstream 1197315 40175262 ~ 40230868 (-)
G24903 NA other downstream 1969994 39455236 ~ 39458189 (-)
LOC103043888 LOC108432835 other downstream 2081267 39273635 ~ 39346916 (-)
arhgap11a NA other upstream 4134 41436041 ~ 41442494 (-)
LOC111196508 NA other upstream 424188 41856095 ~ 41865844 (-)
LOC111196586 LOC108262118 other upstream 437117 41869024 ~ 41880424 (-)
G25678 NA other upstream 1285759 42717666 ~ 42718389 (-)
G25785 NA other upstream 1666915 43098822 ~ 43111401 (-)

Expression


Co-expression Network