LOC103038512 (asap2,LOC108410950,LOC108257785,LOC105894440)


Basic Information

Item Value
gene id LOC103038512
gene name asap2,LOC108410950,LOC108257785,LOC105894440
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035899.1
NCBI id CM008302.1
chromosome length 74127438
location 41588752 ~ 41621272 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_022685790.1
GCGCCGGGCAGGTAGAGGCAGGGCTGCTGGAGTGAAGAGGTGATCTGAGGGAGTGTAATGGAGTGAACAGAGAGCTGGGTGAGCTCTGTGCGCTTCTCTCTGAGGGAGATGGAGTTTGTCATGCCGGACCTGctgtcagtgtgtgagttcaTGGACATTACCAATGAGGACTATAAAGCCCCCACCACCTCTATCTTCACCACCCGGATGACCCACTGCCGCAACACAGTGGCTGCactggaggagGCTCTGGACGCAGATCGCAGTGTTCTGAGCAAAATAAAGAAGTCTGTGAAggccataaacagctctggtctCTctCATGTAGAGAATGAAGAACAGTATATCCAGGCTCTAGAGAAGTTTGGAGAGGCCTGTGTGTACAGAGACGACCCAGATATGGGAGCGGCCTTCATTAAGTTTTCTGTCTTCACcaaagagcttacagctctcTTCAAGAATCTGCTGCAGAACATGAGCAACATCATCACTTTTCCTCTAGACAGTCTGCTGAAAGGAGACCTGAAAGGAGTTAAAGGGGATCTAAAAAAGCCTTTTGATAAAGCCTGGAAGGACTATGAAACCAAAGTGAATAAGATCGAGAAGGAGAAGCGGGAGCACGCCAAGCAGCATGGCATGATCAGGACAGAGATCAGTGGAGGAGAGATTGCagaagagatggagaaagagaggcgCGTCTTTCAGCTGCAGATGTGTGAGTATCTTCTCAAAGTGAATGAAATCAAAACCAAGAAGGGGGTTGACCTGGTGCACAATCTTATCAAGTATTTCCACGCTCAGTGCAATTTCTTCCAAGATGGGTTGAAAGTTGTAGAGAATCTGAAACCAGCTATGGAAAAACTGTCCACAGACCTGACAGCAATTAAGCAGGTGCAGGATGGAGAAAGGAAGCAGCTGACTCAACTTCGAGATGTTCTGAAGTCGTCTTTACAAACAGACACTAAAGATGACTCTCAGGGTAAACAgaacacaggctacagtctgcaCCAGCTACAGGGCAACAAGGCTTTTGGCACAGAACGCTCCGGGATGCTCTCCAAGCGCAGTGAAGGGCTGAGGAAAGTATGGCAGAAAAGGAAGTGCTCTGTGAAGAACGGCTATCTGACCATCTCACACGGAACACCAAACGCACCACCAGCCAAACTCAACCTGCTAACCTGCCAAGTGAAATGCAACCCCGAGGAGAAGAAGAGCTTTGATCTGATATCTCATGACAGAACATACCATTTCCAAGCAGAAGATGAATCAGAATGTCAGATATGGGTGTCGGTTCTGCAGAACAGTAAGGAGGAGGCCCTGAACAATGCCTTTAAGGGGGATCAGGACGAGGGAGAGAACAACATCGTTCAGGAACTCACCAAGGCCATCGTGAGCGAGGTGAAGAGGATGAGTGGGAACGATGTGTGCTGTGACTGCGGAGCTCCAAATCCAACCTGGCTATCCACAAACCTGGGTGTCCTGATCTGCATCGAATGCTCTGGAATCCACCGGGAAATGGGCGTGCACCACTCCAGAATACAGTCTCTTACTTTAGATGTGCTTGGGACGTCAGAACTGTTGCTGGCCAGAAATGTGGGCAATGCAGGCTTTAATGACATCATGGAGGCCAAACTGTCAGGAGAGGACATATCCAAACCAACACCCTCTAGTGACATGCAGAGCCGGAAAGACTTCATCACAGCTAAATACACAGAGAAGCGATTTGCCCAGCGCAGGCGTGTGGATCCGTCTGCTAAGCTCCGCAGTCTGTACGATGCAGTGAAGAGCCGGGACATCTTCTCCCTGCTGCAGGTGTACGCAGAGGGAGTGGATCTAACAGAGACCTTATCCTTACCCAACGAACATGAGCCGGGTGAGACCGCGCTGCACCTGGCGGTGAGAATGGTGGACAGAAACTCCCTCCACATTGTAGACTTTCTTGCACAGAACAGtgGGAATCTGGACAAGCAAACAGGAAAAGGAAACACAGCGCTGCACTACTGTTGCCTGACAGACAGCAGTGAATGTCTGAAACTTCTGCTACGGAGCAAAGCCTCCGTCACCATGACCAATGAAGCTGGAGAGACTCCTCTGGATATGGCCAGGCGGCTGAAGCACACACAGTGTCTAGAGCTGCTGACCCAGGCGCAGACTGGCAAATTTAACGTCCATGTGCACGTGGAGTACGAGTGGTGTCTGCAGAATGAAGACCTGGATGAGAGTGATGATGAAATGGAAGATAAGCCTATCCCTCAAAAGCGTGAAGAACGTCCTGTCAGCTGCTTTATTCCTAGCAGTGGCCCCATGCAGCCCAATATGGCGGCCCTGGCACGAGATGTGGTCAGTGCGGTTCGGGAAAAGCAGAGGGGCTTCATCCCCAGTATGATGTGTAATGAAACCTACGGGACTCTAATGAACAGCCCTCCTCCATCTAACACACTCCCCATCAATTTACCACAGCTACCCCCACGCAACACTCTCACAGgaaatGGGGGCTGGAAAAATGTGGAGGGAGTAGGGAGACAGAGATCTTCATCAGATCCCCTTAACCCCACCAGTCCAGAAAGTAACAGTTCAGACTATGTCCTCCCTCCCGCTGCCCCGCCTCCTCCAGTAATAAAGAAGCCTATCCCCACGGAGCCTCGGACCCACACTAAGAATGTTCCTCTGCCTTCAGTGCCACCTGCCATGCAGATGCCATCTGTTCCCCCAGTTCCAAACATTCCTACTCCACCTTCATTCATTCCAATACCTCCTCCTCCCCCAGTGCCCCCTGCACCCCCGTATAAACCTGCTGCTCCGCCCGTACCCTACCAGCCCAGAGGCCCTGCTCTCAAACCTCCCACAGGAGGTCTTCCAAGAACACAAACAAGCAGACTTAAACCCAATCCTGTATCAGAAACAACAGAAAAGGATGGTCCTCCCCCACCTCGTAATCCTGCAGCCACATCACCTCCAGCCCCACCCCCAGTGCCTAAGCCCAGAGCGACCCAGGCGaaacAGAAACCTAAACGAGTAAAAGCCATCTATAAGTGTAAAGCTGATAACCCAGATGAGCTGACCTTTGCTGAGGGAGAGGTGATCATAGTGGATGGAGAGGAAGACAAGGAGTGGTGGGTGGGCCATATTGAAGGGGATCCTACCAGAAGAGGAGTCTTCCCTGTTACATTTGTGCACTTCATCACTGACTGATGAAGTCAGTAATCAGTGGACACTGAGActggcaataaaaaaaacaaagacggACGAGCAGAAGATTAGGTTATGTTCTCAGCtgtaaaagttatttttcaGTGATGACCTCATGTAAGATATCtgcaaaattatgtttaaacattttctaagaCAAATAAGAGAATAGCTAAATGTGTGTTTGCTTTTATTGTTGGTCATCTCACTCCAgtgcaatataatataattaaatcttAATGCTTTGAGCAGGGATTCATCATACTTCAGATAAAATGGTTGTGGCCTTATCACAGTAAAGTCCGAATATCTGCTGGATTCTTATTCAAGTTTTTAGAGAGCATTTTGGAGTTTGGTTGCAGAGCAACTCtatgtgtatattttaattgGATGAACTCTCAAGCACTGTATCTCTTAGACTTGTTGAAATACTTCCCCATTGCAGTTCTTGGACACAGTCAATAAGTTTTTGCATCATTTTTAACAAGtgtggatttattttatttttggaaatCATAATTTGTGACAAAAATAACAGAACGTGTCTTTAAAACAAGTAgtactgtgaaaaatatttacaaatacaaacagTATCAGTTTTTAATGCCAACAAATAATACTTCCTATTGATGCCATTACTGACTCAATCAGTATtgagtaaatgtgttttaataaatgtttaaacaagCCATTGTAATCTCAGCACACtgactgtaaatgttttttctgcataaaatgaaattatgaaCTA
>XM_022685794.1
GCGCCGGGCAGGTAGAGGCAGGGCTGCTGGAGTGAAGAGGTGATCTGAGGGAGTGTAATGGAGTGAACAGAGAGCTGGGTGAGCTCTGTGCGCTTCTCTCTGAGGGAGATGGAGTTTGTCATGCCGGACCTGctgtcagtgtgtgagttcaTGGACATTACCAATGAGGACTATAAAGCCCCCACCACCTCTATCTTCACCACCCGGATGACCCACTGCCGCAACACAGTGGCTGCactggaggagGCTCTGGACGCAGATCGCAGTGTTCTGAGCAAAATAAAGAAGTCTGTGAAggccataaacagctctggtctCTctCATGTAGAGAATGAAGAACAGTATATCCAGGCTCTAGAGAAGTTTGGAGAGGCCTGTGTGTACAGAGACGACCCAGATATGGGAGCGGCCTTCATTAAGTTTTCTGTCTTCACcaaagagcttacagctctcTTCAAGAATCTGCTGCAGAACATGAGCAACATCATCACTTTTCCTCTAGACAGTCTGCTGAAAGGAGACCTGAAAGGAGTTAAAGGGGATCTAAAAAAGCCTTTTGATAAAGCCTGGAAGGACTATGAAACCAAAGTGAATAAGATCGAGAAGGAGAAGCGGGAGCACGCCAAGCAGCATGGCATGATCAGGACAGAGATCAGTGGAGGAGAGATTGCagaagagatggagaaagagaggcgCGTCTTTCAGCTGCAGATGTGTGAGTATCTTCTCAAAGTGAATGAAATCAAAACCAAGAAGGGGGTTGACCTGGTGCACAATCTTATCAAGTATTTCCACGCTCAGTGCAATTTCTTCCAAGATGGGTTGAAAGTTGTAGAGAATCTGAAACCAGCTATGGAAAAACTGTCCACAGACCTGACAGCAATTAAGCAGGTGCAGGATGGAGAAAGGAAGCAGCTGACTCAACTTCGAGATGTTCTGAAGTCGTCTTTACAAACAGACACTAAAGATGACTCTCAGGGTAAACAgaacacaggctacagtctgcaCCAGCTACAGGGCAACAAGGCTTTTGGCACAGAACGCTCCGGGATGCTCTCCAAGCGCAGTGAAGGGCTGAGGAAAGTATGGCAGAAAAGGAAGTGCTCTGTGAAGAACGGCTATCTGACCATCTCACACGGAACACCAAACGCACCACCAGCCAAACTCAACCTGCTAACCTGCCAAGTGAAATGCAACCCCGAGGAGAAGAAGAGCTTTGATCTGATATCTCATGACAGAACATACCATTTCCAAGCAGAAGATGAATCAGAATGTCAGATATGGGTGTCGGTTCTGCAGAACAGTAAGGAGGAGGCCCTGAACAATGCCTTTAAGGGGGATCAGGACGAGGGAGAGAACAACATCGTTCAGGAACTCACCAAGGCCATCGTGAGCGAGGTGAAGAGGATGAGTGGGAACGATGTGTGCTGTGACTGCGGAGCTCCAAATCCAACCTGGCTATCCACAAACCTGGGTGTCCTGATCTGCATCGAATGCTCTGGAATCCACCGGGAAATGGGCGTGCACCACTCCAGAATACAGTCTCTTACTTTAGATGTGCTTGGGACGTCAGAACTGTTGCTGGCCAGAAATGTGGGCAATGCAGGCTTTAATGACATCATGGAGGCCAAACTGTCAGGAGAGGACATATCCAAACCAACACCCTCTAGTGACATGCAGAGCCGGAAAGACTTCATCACAGCTAAATACACAGAGAAGCGATTTGCCCAGCGCAGGCGTGTGGATCCGTCTGCTAAGCTCCGCAGTCTGTACGATGCAGTGAAGAGCCGGGACATCTTCTCCCTGCTGCAGGTGTACGCAGAGGGAGTGGATCTAACAGAGACCTTATCCTTACCCAACGAACATGAGCCGGGTGAGACCGCGCTGCACCTGGCGGTGAGAATGGTGGACAGAAACTCCCTCCACATTGTAGACTTTCTTGCACAGAACAGtgGGAATCTGGACAAGCAAACAGGAAAAGGAAACACAGCGCTGCACTACTGTTGCCTGACAGACAGCAGTGAATGTCTGAAACTTCTGCTACGGAGCAAAGCCTCCGTCACCATGACCAATGAAGCTGGAGAGACTCCTCTGGATATGGCCAGGCGGCTGAAGCACACACAGTGTCTAGAGCTGCTGACCCAGGCGCAGACTGGCAAATTTAACGTCCATGTGCACGTGGAGTACGAGTGGTGTCTGCAGAATGAAGACCTGGATGAGAGTGATGATGAAATGGAAGATAAGCCTATCCCTCAAAAGCGTGAAGAACGTCCTGTCAGCTGCTTTATTCCTAGCAGTGGCCCCATGCAGCCCAATATGGCGGCCCTGGCACGAGATGTGGTCAGTGCGGTTCGGGAAAAGCAGAGGGGCTTCATCCCCAGTATGATGTGTAATGAAACCTACGGGACTCTAATGAACAGCCCTCCTCCATCTAACACACTCCCCATCAATTTACCACAGCTACCCCCACGCAACACTCTCACAGgaaatGGGGGCTGGAAAAATGTGGAGGGAGTAGGGAGACAGAGATCTTCATCAGATCCCCTTAACCCCACCAGTCCAGAAAGTAACAGTTCAGACTATGTCCTCCCTCCCGCTGCCCCGCCTCCTCCAGTAATAAAGAAGCCTATCCCCACGGAGCCTCGGACCCACACTAAGAATGTTCCTCTGCCTTCAGTGCCACCTGCCATGCAGATGCCATCTGTTCCCCCAGTTCCAAACATTCCTACTCCACCTTCATTCATTCCAATACCTCCTCCTCCCCCAGTGCCCCCTGCACCCCCGTATAAACCTGCTGCTCCGCCCGTACCCTACCAGCCCAGAGGCCCTGCTCTCAAACCTCCCACAGGAGGTCTTCCAAGAACACAAACAAGCAGACTTAAACCCAATCCTGTATCAGAAACAACAGAAAAGGATGGTCCTCCCCCACCTCGTAATCCTGCAGCCACATCACCTCCAGCCCCACCCCCAGTGCCTAAGCCCAGAGCGACCCAGGCGAAACCTAAACGAGTAAAAGCCATCTATAAGTGTAAAGCTGATAACCCAGATGAGCTGACCTTTGCTGAGGGAGAGGTGATCATAGTGGATGGAGAGGAAGACAAGGAGTGGTGGGTGGGCCATATTGAAGGGGATCCTACCAGAAGAGGAGTCTTCCCTGTTACATTTGTGCACTTCATCACTGACTGATGAAGTCAGTAATCAGTGGACACTGAGActggcaataaaaaaaacaaagacggACGAGCAGAAGATTAGGTTATGTTCTCAGCtgtaaaagttatttttcaGTGATGACCTCATGTAAGATATCtgcaaaattatgtttaaacattttctaagaCAAATAAGAGAATAGCTAAATGTGTGTTTGCTTTTATTGTTGGTCATCTCACTCCAgtgcaatataatataattaaatcttAATGCTTTGAGCAGGGATTCATCATACTTCAGATAAAATGGTTGTGGCCTTATCACAGTAAAGTCCGAATATCTGCTGGATTCTTATTCAAGTTTTTAGAGAGCATTTTGGAGTTTGGTTGCAGAGCAACTCtatgtgtatattttaattgGATGAACTCTCAAGCACTGTATCTCTTAGACTTGTTGAAATACTTCCCCATTGCAGTTCTTGGACACAGTCAATAAGTTTTTGCATCATTTTTAACAAGtgtggatttattttatttttggaaatCATAATTTGTGACAAAAATAACAGAACGTGTCTTTAAAACAAGTAgtactgtgaaaaatatttacaaatacaaacagTATCAGTTTTTAATGCCAACAAATAATACTTCCTATTGATGCCATTACTGACTCAATCAGTATtgagtaaatgtgttttaataaatgtttaaacaagCCATTGTAATCTCAGCACACtgactgtaaatgttttttctgcataaaatgaaattatgaaCTA

Function

symbol description
asap2 Predicted to enable GTPase activator activity. Predicted to be involved in positive regulation of GTPase activity. Predicted to be located in Golgi cisterna membrane and plasma membrane.

NR:

description
PREDICTED: arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 2-like

GO:

id name namespace
GO:0008270 zinc ion binding molecular_function

KEGG:

id description
K12488 ASAP; Arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein

RNA

RNA id representative length rna type GC content exon number start site end site
XM_022685790.1 True 3940 mRNA 0.47 29 41588752 41621272
XM_022685794.1 False 3934 mRNA 0.47 29 41588752 41621272

Neighbor

gene id symbol gene type direction distance location
LOC103041996 LOC108410928 coding upstream 21592 41547974 ~ 41567160 (+)
ywhaq ywhaq,LOC107721301,LOC107549101,LOC107756586,LOC107668239 coding upstream 43255 41534105 ~ 41545497 (+)
fmn1 fmn1 coding upstream 160582 41403996 ~ 41428170 (+)
aven NA coding upstream 308815 41254714 ~ 41279937 (+)
emc7 emc7,LOC107549094,LOC107671783,LOC107756596,LOC107721381,LOC107601948 coding upstream 339181 41244537 ~ 41249571 (+)
LOC103039741 mboat2b,LOC103039741,LOC108410960,LOC108257786,LOC107668249,LOC107601827,LOC107693237,LOC107756580,LOC106607658 coding downstream 13683 41634955 ~ 41705390 (+)
kidins220 LOC103040274,LOC108410983,LOC108258057 coding downstream 87498 41708770 ~ 41733546 (+)
rnaseh1 LOC107693208 coding downstream 696251 42317523 ~ 42326404 (+)
LOC103042546 LOC108411077 coding downstream 782648 42403920 ~ 42496318 (+)
LOC103034213 NA coding downstream 895460 42516732 ~ 42524073 (+)
G25426 NA non-coding upstream 294 41588099 ~ 41588458 (+)
G25407 NA non-coding upstream 11114 41576283 ~ 41577638 (+)
LOC111196462 NA non-coding upstream 69457 41507988 ~ 41519295 (+)
G25355 NA non-coding upstream 91013 41495866 ~ 41497739 (+)
G25351 NA non-coding upstream 102484 41485489 ~ 41486268 (+)
G25428 NA non-coding downstream 3509 41624781 ~ 41632161 (+)
G25458 NA non-coding downstream 112731 41734003 ~ 41734204 (+)
G25459 NA non-coding downstream 113315 41734587 ~ 41735710 (+)
G25493 LOC108262118 non-coding downstream 234687 41855959 ~ 41870007 (+)
G25492 NA non-coding downstream 243979 41865251 ~ 41865609 (+)
G24972 NA other upstream 1763034 39819276 ~ 39825718 (+)
eif2b2 eif2b2,LOC107697194,LOC107685362 other upstream 2190874 39388867 ~ 39397878 (+)
LOC111196173 NA other upstream 2247781 39325083 ~ 39340971 (+)
G24719 NA other upstream 2542971 39045170 ~ 39045781 (+)
G24583 NA other upstream 2641530 38939357 ~ 38947222 (+)
G25601 NA other downstream 770368 42391640 ~ 42392938 (+)
fgfr1op NA other downstream 876450 42497722 ~ 42516642 (+)
LOC103026014 LOC103026014,LOC108411425 other downstream 1638348 43259620 ~ 43262099 (+)
rps29 NA other downstream 1739197 43360469 ~ 43363444 (+)
G25879 NA other downstream 1800499 43421771 ~ 43422046 (+)

Expression


Co-expression Network