LOC103026793 (adcy1a,LOC108416099,LOC108257925,LOC107708029,LOC107697434,LOC107559745,LOC107581454,LOC107687179)


Basic Information

Item Value
gene id LOC103026793
gene name adcy1a,LOC108416099,LOC108257925,LOC107708029,LOC107697434,LOC107559745,LOC107581454,LOC107687179
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035899.1
NCBI id CM008302.1
chromosome length 74127438
location 43428463 ~ 43458757 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_022686387.1
cATCCTGTTTGCTGACATTGTTGGGTTCACCAGTTTGGCGTCTCAATGTACGGCTCAGGAGTTGGTCAAACTGCTGAACGAACTCTTTGGGAAGTTTGATGAGCTTGCTACGGAGAATCACTGCAGAAGGATAAAGATCCTGGGGGACTGTTATTACTGTGTGTCAGGCTTGACTCAACCCAAAGCTGACCACGCACACTGCTGTGTGGAGATGGGCCTGGATATGATTGACACCATCACgtctgTTGCAGAGGCTACAGAGGTGGATCTGAATATGCGTGTGGGTTTACACACGGGCCGTGTGCTGTGCGGAGTGCTGGGGTTAAGGAAGTGGCAGTATGATGTCTGGTCAAATGATGTCACACTGGCCAACATGATGGAGGCAGGAGGACTTCCTGGTAAGGTTCATATCACCAAGGCAACCCTGGAGTGCCTGAACGGAGATTACGAGGTGGAGCCGGGCTACGGCAGCGAGAGACACACCTTCCTCAGCAAGCACGCCATCGAGACCTTCTTCATCGTGCCCTCACACAGACGCaagatCTTTCCCGGTTTGATCCTGTCGGATATTAAACCCGCAAAGAAGATGAAGTTTAAGACAGTCTGCTATCTGCTGGTGCAGCTCATGCACTGTAGGAAGATGTTTAAAGCCGAGATTCCTTTCTCCAACGTCATGACCTGCGAGGATGATGATAAGagGCGAGCTCTGCGCACAGCTTCGGAAAAGTTGCGCAGTCGCACGTCTTTCTCAGCTGGAGCGCTGCAAAACTCTCCCGGGACACGAGTCAACCGCTACATTGGGCGACTGATCGAAGCTCGGCAAACTGAGTCTGAGACGGCGGACCTCAATTACGTCACTCTGACCTAtcggaacagagagagagagaagaggtaTCAACAGGTGTATGATGATGGATTTATCAGCAGTGTGGCGATCTCGTTGGTCCTCACTTCACTTTTTGCTTTTGTCTACTTTCTCATCATCCCTCAGGGTCTGGTGATTGTGATACTGCTGGTTCTCTGTATCTGCTTTCACATGGCGAGTGTAATGTACCTCCACATCACTCATGTGCAGtgttCTCCTGACTGTCTCACCCTGCAGATCAGGACCGTTTTGTGTGGCTTTCTGGTGCTTCTGTCCTATTCTGTGACGCAGgggtgtgtgGTGGCGTGCATGCCCTGGTCATGGGGGACGAACTCCAGTGTCTCCTTTATCACGGTGGTCATAGTGAACGGCACTGCAGcaggagtgagtgtgtgcaaaTACACTCCCTACGTCTTTTTATCGTGTGTGATGCCGTCGCTCTCTGTGGCCCTCTACCTGCGCGTGTCATCATTACCCAAAATTCTCCTGCTTTTTCTCCTCAACATCCTCCACACTGTCGTCATGGAGACCAGTGGCTACCGGCAGGCTGTGGGAGGAGGCTTTTTTCACTCACTTGGGTATGATCCTGTTCTGGCAATGCTGCTTTTCTCTGGGGCCCTAATATTACACTGCAGACAACTGGACCTCAAACTCAGACTGGACTACCTCTGGGCCACTCAGgctgaagaggagagagatGACATGGAGAGAGTAAAACTGGACAATAAGAGGATTCTGTTTAACTTGCTTCCTGCTCATGTGGCCCAGCACTTTCTCCTGTCCAATCCACGCAACATGGACCTGTACTACCAGTCCTACTCTCAGGTTGGTGTTCTGTTTGCCTCCATCCCCAATTTCAACGACTTTTACATCGAACTGGACGGAAACAACATGGGTGTGGAATGTCTGCGGCTTCTCAACGAGATCATTGCAGACTTTGACGCGCTGCTGGATAAGGAGTGCTACAGGGACATAGAGAAGATCAAAACCATTGGCAGCACTTACATGGCTGCAGTGGGCCTTGTTCCCACTACTGGATCCAAGCCCAAGAAGTCCATTTCAGCACATTTATGCACAGTGGCTGACTTTGCTATAGAGATGTTTGATGTTCTGGATGCGATAAACTACCAGTCATACAACGACTTTGTGCTCCGAGTGGGTATAAATGTAGGTCCAGTGGTGGCAGGAGTGATCGGTGCTCGCAGGCCTCAATATGACATCTGGGGAAACACAGTCAATGTAGCTAGCAGAATGGACAGTACTGGAGTACAAGGCAAGATCCAGGTGACCGAAGATGTCTTCCGCCTCCTGTCTGGTCATTACCGCTTCCTGTGCCGTGGCCAGGTCAGCGTCAAAGGCAAAGGCCAAATGCTCACCTACTTCCTGGAGGGTTGGTCGAACGAGGGCAGTCTCCAGATGCGATCCAAGAGCCTGGAGAACCGGGTGAGCTCCAGCCCTTGCATCCGGACCAAgttaagccccgcccccacgGTGAGCAGTTACGGAGTCAAAGCACCTAGTGTGGGCCCTGGTCCCGCCCCCTCCAACAACAGCATCCTGTACCTGCCTTCTGTGTCCGTTGACATGGAGAAGGAGGTGTGACTGCCATTGAGATGGATTCTGTGGCAAGCAATCTACTTTCCGATTCGAAGAGGAGGGAGTAcaagaaaagagaggaagaaggacACAGAAGCATGGAGTgacagagagatagaaggaATGAAATGGATGGATGCTGGGAGGGAGTGACTAGAGAAGAAAGGCCAACCCTGCTGTACACAGGTTGACCTTGATCTTTactagagaggagagagggagagatgctAATTTCTTAAATACAGAGAGTAGCCCttcccttcacacacacacaaacataacgAGCAGTTTTGtctatttgtgtatgtgtgtgtgtgtgtatgtttgaaaATGAGCATTAGCacatatgtgtgcatgtgtgtgctgTAAGAGTTTGCGTTTTAATGAGTCTTCCTCAGTCCAGCTAGATATCAGGGGCTCCTAAACCTGGAGCATGTGTTCTACAGTAATGGCAGCTTCACACCAACAGAGGAGACACACACTCctctatgtgtgtttgtgtgtgtgtgtgcatgtgtgtctattagtttgtgtgtgtgggactgTTCAGCAATGCTAGAGAATTAAGGCCACGGCATCAACCATTCAGAGCATGTTTATATAGTGTGGACTGAACAGTTAAAATCTAAACAGCgctgtattttacatttcttatgtgtgtgtgtgtgtttgtctgtgtgtgtgtgtgtgtgtgagaaagagagagagagagtggttgtATGCAAAAGACAGCAAGTGTTACAGACAAGGAGAGATTGTGAGAGAATCTACTACCCTTATGAAACCAGTCAGTGCAGGAAAAGAACactttttgtgtttctgttcatTTCTTGGGAAAGGCCTGTGCCAACGTACAGTAAATGAACTTCATGACCTGTAACATTCAAAAGTGTTTGTCTCGCAGCCGTTGCCTTTTGAGTGACTTGCCAAAACTGTACTGAACAATGATGACACGGTACATTCAGAGGCCaaattctacttttttttttttttttaactgctggcAAATCATACTGGTCAGTTTTGCTATCATTAACAGTCTTTCTAATCTTTGGCTTGGATGAGGGTTGGGTTCCTCCGAGGCTAGGATCAGGAAGGTTCGTGTTTGCGCGGCCGCTGACGCTTACGCACAGCCGCTTGGAGAAGAACATTCTCGACGTCAGCGCTCATTTCCCGCAGCCCTTTGACCTCTCAATGAGATGGAGATTTCCTCTCCagcgtaaacacaacagcaaagtCAGCTCTATCCTCTGAGATACGTTTCCACCCGCTGTTGATGGTGGACTTCACAAGTTCACTAACAGTCAGTACTCTTGAATTATCAGCTTGATTATCTGTCTGTCAATACGGAAGCTTAGCTATTCATGCTAAGCTAGCTATTACATGAACCAACACAACTGTACATGGGGATgaaagaaacaagcaaaaaaaaaaaaaacagaagtttttttttttttgatagtgTAAAAATAGCTCCTGTGGCTCGTTCTTAATTCGCTGATATTTGTTCTTTTTGAGAGTTTCTAAGTAGGCTAATGCTTAAACTGATCCCGTTAGTGCTGCTGGCAACAGGGATTTAGCCTTGTGCTTGCACAAGGAGTGCTAGCACAGGATCAAACTTGCATGAGATTTAAATGGTGTGCTAAGCTGATGGTTGCTGTAAGACGCTCTTTGAGcctttggttgttttttttatttttttttattaaacatctgGGACCAGATTCACAAAAGtgtgaaaagaaataaatgttttttagacTTAGTGCTTAGTCTTCATTTCAGACTTGAGATAAATGTTAAgacatttttattgatatttaaaaaaatgtaaagtagtggaaagtttttttcttaGGAAAACTTCTGTGAATCTGGTCCCTGGATCTTAATAGAGCTTGCACAAAGCCACAGGTGGTTTAAGACTCACTGGCAAAGAGCAGTAGGTCTGATCTGTTGGTCTCTCatgttcctttttttaattttctgttttttctttcttttttactttttggtgAAAAGTATAGCTTTGATATTTCTCCAAGTATGCCTAGGGAATGAAGTTCATGGCTTCACGCATGCCGTTCTGCGTGTCCCTCTTCGCATGCCATAATTCTACCTTGTCTGCTCTTTTAGCTAAGTGCAATGTGTTTCTAATGCATGACTAATgcaaaaactgaacaaaaaaaaagggttaagtgttaaataaatggaaaaaaggcTTTAGCTGCACTGCATGAGCCCAGATGAGtggccttttttcttttttactgttttttgggATTCAGACCTTTATCAACAGCTCGTTCCTTTCCTTCTTCATGCATGGTGCTGTCACGTGTTGGAGAAAGCTTGGGAGTATTGTAGCATATTGCCGCCTTTTCTGGCTCTTGAGGTGACTGCCTTCTATCCAGCGGTTGTCGGGGTGGGTGTATTCCTTTGTGCCAACACATATCGTTACCGACATATCAACTCCAGTGTTCTATTGTAGCACAAattttgttatattgtgtttGATTCCACTTAtgatgttgtttttaaaaagaaaatgtagttCTCTTATGCACTGGATCCACCAAGGGCACAGTCTTGGCTTCCTGTGAAACTTATCGGGGTGGGATGTGTAGATGTTGGGATGTGTAGTCTTCTCATGTGTTTTGGAGaagtatattttctttaaactcTATCAGTGCCGAGTAAAGAGTTCTTAGCTGAAGTATTACTATTTTGTGTGACAGAACAAAGCTCTGTAAGCTTGTAATTGGATACAGGTCAAATGCACTGTTTCAAATGACACTTTCAGGAGCTTTGCATTTTGTTGCACTCGTGGCCCGAGAACCTCCCTTCACCCCAAAAGCGAAGGCTGTTTGAGGTGCTACAGCAGCTGAGAGACCTAACACAGTTTCATCTTTCTACACGAAATGTTCAATCATTATTCctaagccaaaatcttcctttTATCTATGAGTAGGCCTAGTTCAGATTTATGATCCAACAAATGTAGccacatgacaaaaaaaatatatggttctattttctatttgcaAACTCCAGTGGCCTAACTTACTGCCGTTCGGAATATTACGACCAGATCGACTTTATTAATGCATAAAAGTGCACAGTACAAATATATAGACTAGATTTTCATGTGAATTAGATATTTTCATATTTGATACGGGTTTAACTTATTGTATGTATGAAACCTTCTGTAGAGTAAACAGAAAGTATTTTACTgatcttaaatatatatgtgctaTTTTTGGGGTTGCAATGTATTGATTGCAATGGTGATATATGTGAATGTAAATTTcatattgagatcttttataCTTGTGTTTGCACTGttctggaataaaataacaatgagaGACAGA

Function

symbol description
adcy1a Predicted to enable adenylate cyclase activity. Predicted to be involved in adenylate cyclase-activating G protein-coupled receptor signaling pathway and cAMP biosynthetic process. Predicted to act upstream of or within cyclic nucleotide biosynthetic process and intracellular signal transduction. Predicted to be located in plasma membrane. Predicted to be integral component of membrane. Predicted to be integral component of plasma membrane. Human ortholog(s) of this gene implicated in autosomal recessive nonsyndromic deafness 44. Orthologous to human ADCY1 (adenylate cyclase 1).

NR:

description
PREDICTED: adenylate cyclase type 1-like

GO:

id name namespace
GO:0035556 intracellular signal transduction biological_process
GO:0009190 cyclic nucleotide biosynthetic process biological_process
GO:0016021 integral component of membrane cellular_component
GO:0004016 adenylate cyclase activity molecular_function
GO:0000166 nucleotide binding molecular_function

KEGG:

id description
K08041 ADCY1; adenylate cyclase 1

RNA

RNA id representative length rna type GC content exon number start site end site
XM_022686387.1 True 5835 mRNA 0.45 17 43428463 43458757

Neighbor

gene id symbol gene type direction distance location
LOC103031694 myh6,LOC103031694,LOC102786665,LOC108251423,LOC780532 coding upstream 249244 43172940 ~ 43179219 (+)
LOC103030407 LOC108411385 coding upstream 257228 43136783 ~ 43171235 (+)
LOC103030938 NA coding upstream 293075 43115778 ~ 43135388 (+)
LOC103031260 NA coding upstream 317275 43092165 ~ 43111188 (+)
LOC103041928 pdia6,LOC108411347,LOC107732640,LOC107693218,LOC107549125 coding upstream 376576 43044192 ~ 43051887 (+)
LOC103027693 mcm3l,LOC108416133,LOC107712296,LOC108258154,LOC107697457 coding downstream 216244 43675001 ~ 43688806 (+)
LOC103035929 palld,LOC107665352 coding downstream 263005 43721762 ~ 43883044 (+)
trmt1l trmt1l,LOC107698377 coding downstream 441045 43899802 ~ 43909913 (+)
LOC103028025 NA coding downstream 453076 43911833 ~ 43943410 (+)
mettl11b mettl11b,LOC107696087,LOC107698334,LOC107726432,LOC107732414 coding downstream 527897 43986654 ~ 43998810 (+)
G25834 mgat2,LOC107728126,LOC107564584,LOC107704380 non-coding upstream 72436 43350895 ~ 43356027 (+)
G25828 hsp90aa1.1,LOC108411456,LOC101068853,LOC103369947,LOC108231826,LOC105919227,LOC102218115,LOC103457915,LOC103024454,LOC108257813,LOC108411468,LOC107704347,LOC107557012 non-coding upstream 86734 43329527 ~ 43341729 (+)
G25662 wtap,LOC107696108,LOC107601562,LOC107726473,LOC107549122 non-coding upstream 668492 42753358 ~ 42759971 (+)
G25657 NA non-coding upstream 698954 42727634 ~ 42729509 (+)
G25647 NA non-coding upstream 710074 42717658 ~ 42718389 (+)
LOC111191905 NA non-coding downstream 4843 43463600 ~ 43465928 (+)
G25888 NA non-coding downstream 25338 43484095 ~ 43484399 (+)
G25893 NA non-coding downstream 58041 43516798 ~ 43517094 (+)
G25914 NA non-coding downstream 137281 43596038 ~ 43644026 (+)
G25925 NA non-coding downstream 207864 43666621 ~ 43673719 (+)
G25880 NA other upstream 3557 43424392 ~ 43424906 (+)
G25879 NA other upstream 6417 43421771 ~ 43422046 (+)
rps29 NA other upstream 65019 43360469 ~ 43363444 (+)
LOC103026014 LOC103026014,LOC108411425 other upstream 166364 43259620 ~ 43262099 (+)
fgfr1op NA other upstream 911821 42497722 ~ 42516642 (+)
LOC103033920 LOC108416105 other downstream 31566 43490323 ~ 43494316 (+)
fau fau,LOC108411505,LOC107704371 other downstream 3069611 46528368 ~ 46549553 (+)
G26915 NA other downstream 4819510 48278267 ~ 48315894 (+)
G26995 NA other downstream 5097040 48555797 ~ 48641905 (+)
LOC103035773 NA other downstream 5120046 48578803 ~ 48618075 (+)

Expression


Co-expression Network