mettl11b (mettl11b,LOC107696087,LOC107698334,LOC107726432,LOC107732414)


Basic Information

Item Value
gene id mettl11b
gene name mettl11b,LOC107696087,LOC107698334,LOC107726432,LOC107732414
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035899.1
NCBI id CM008302.1
chromosome length 74127438
location 43986654 ~ 43998810 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XM_022686463.1
CTCTGAGGCCAACACACCAGCTCGGTCCGTTTGTGCTGACAGATTCTGACTCTAGCAGCTCAGAATGTCTGAGTCAACAGACATAATGGAGTTCAGTGGCACTCATCAGGCTTTCCGCAACCGCTGGGCCAAGACAGACGACAACATGTGCAGACACAGCATGTCCCTCCATCTGCACACCATTCTGAGGAAGGAGTTCTTCGCCAGCTACCTGTACATGCTGGAGCAGACCCCCCTGGTGAAACTGTATCCTGTGACCTGTGAGTACATTAAGGGGGAGAAGCAGTTCTACTACCGAGCCCAGAACTTCTACAAGGGCATTCCAGCATCAGAGGAGGGCATGATGGGAGATTTTGTGGAGATCTCGGAGGTGGACCTGGAGGGATCTAGACAGTTTTTGAAGAAGTTTGTGGGTCCGGGGAAGGCTGGTAGCAGGCGGGCGCTGGATTGTGGATGTGGTATTGGACGGGTGTCTAAAGGAGTTCTGTTCCCCGTATTTGAAAGCATGGAGATGCTGGACATGATGGAAGACTTTATTCTTCACGCACACCAGCGTTATCTGGGTGACTACGCAGACCGAGTGGAGTCATACTACGTCTACAACTTGCAGGATTTCATCCCTCCACCCAACAGATATGATGTCATTTGGATGCAGTGGGTAGCCTGCCACCTGACAGATAAAGATGTGATGCAGTTTCTCAGGCGAGCAAAGGAGAGCCTGAGACCCAACGGTGTTATCATTATAAAAGACAACATGGCACGACAGGGCTGCAGACTGGACCCTGTCGACAGCAGCATCATCCGACACCTGGACATCATGAAGAACATTATCCAGAAAGCGGGACTGACCATACTGGACGTGGAGAAGCAGGAGGGCTTCCCTGAGGTCGTTGTGCCGGTTTGGATGATTGCCATGCATTAATCCCAGCAGTTTCCAGACTgatttaaatcaatcaatcaatcaatcaatcagtgttATTTATATACCTTCAGTTTACACTCCAACATTCAGGCATTCATGCATGTACgtaatttattttcttgcaaGTGTTTGAGGCGGTATATTTTAATAGGGTTGCTGAACTGATGTTATTcgcaaaaacatatatttttttgtatatttatgtttatgtgatACTTATGTTTATACacagatatttataaaatatacacattCAGATAGAAATGCATCTgcataaatgttacaaatgtaTTTCTGTACGGTAACAGATGcagtagaataaataaatacagctttATGAAAAAATTGGTCGcctaaattttacattttgtcaattgttttactttttggtttaacataatatattattacaaaatatttgCATCAAAGTATATTACACAGATACATTTTCTTTGATTAAACTATGATTGGCTCTTGCAAAAGCATTCCAATGTTTCAGTATTGTGCTTTTGACACGTCCTCAGACCTTAATAAGCAGACCAGACATTTCAACTGTCAACTGTAATCAGGAAATTGTCAGCTGAATCAAATGGTTTAACTTTATAAATTCTCTGTCTCCTCAAACCTAGTGCTAATACTCATCTAATATAATCTCCTCTAAGCAACTTTGTAAACATTcagaaatgaaagtaatcacAGCCCCATAGGCAGAGGAGATATCTATAAGATAAACGTTTCCATTGTGCAGATTATTAATAAGAAATGGCTGTGGAGGTAATAGTGAGATATCGCTAATTAAAACTCTTTTCTACTATGCagcatatttaaatatctgttaatggcaattatttaaaaacaaatctgcCAATATGATTGCAATATGTTCATGCAACCCCAAATTTTagtattttcttaaaataaaaaaaactagcaaaatagcaaaataaaaacccaCATGTAAAAATAGAACAATATATTACAATGTGATTACAtgtatacataaaatatatatttggcaGCCTATTTACATTATCTAATGTGTTATGTTcttacaatacaaaaatacttttacactaggaataataaaaaaaacattttttttttaacattttcaggATAACCATGTCAATGTCTTTGCATCTTCTGtgctaatgcatttatttattttaaaagattattttacaattgtttttatttttttattttctacacatATTACAGATAAACCTTTTTTAAGATAAAGTTATTTGTTGTGTCTGTGGCATGCTATATACTAAAAAAATTCAGTGTATTGGCTCTGCTGTTGTGTACCCTATCACCACAaactttttcttaatattaTACAAAAGTGTGTGTACCCTGATTAATTATTATCCTCTATAGAAAACATAGTTTGTCAGATTCAGCTAAGTACAA

Function

symbol description
mettl11b Predicted to enable N-terminal protein N-methyltransferase activity. Predicted to be involved in N-terminal protein amino acid methylation. Predicted to act upstream of or within methylation. Predicted to be located in nucleus. Predicted to be active in cytoplasm. Orthologous to human NTMT2 (N-terminal Xaa-Pro-Lys N-methyltransferase 2).

NR:

description
alpha N-terminal protein methyltransferase 1B

GO:

id name namespace
GO:0008168 methyltransferase activity molecular_function

KEGG:

id description
K19579 NTM1B, METTL11B; protein N-terminal monomethyltransferase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_022686463.1 True 2338 mRNA 0.37 4 43986654 43998810

Neighbor

gene id symbol gene type direction distance location
LOC103028025 NA coding upstream 43244 43911833 ~ 43943410 (+)
trmt1l trmt1l,LOC107698377 coding upstream 76741 43899802 ~ 43909913 (+)
LOC103035929 palld,LOC107665352 coding upstream 103610 43721762 ~ 43883044 (+)
LOC103027693 mcm3l,LOC108416133,LOC107712296,LOC108258154,LOC107697457 coding upstream 297848 43675001 ~ 43688806 (+)
LOC103026793 adcy1a,LOC108416099,LOC108257925,LOC107708029,LOC107697434,LOC107559745,LOC107581454,LOC107687179 coding upstream 527897 43428463 ~ 43458757 (+)
gorab gorab coding downstream 37014 44035824 ~ 44041444 (+)
prrx1 prrx1,prrx1b,LOC108439841,LOC107553451,LOC107698373,LOC108257538 coding downstream 42955 44041765 ~ 44056322 (+)
LOC103028637 LOC108439839 coding downstream 79017 44077827 ~ 44195882 (+)
elp3 elp3,LOC107696156,LOC107698368,LOC107599080 coding downstream 220395 44219205 ~ 44254232 (+)
pnoc pnoc coding downstream 282312 44281122 ~ 44297719 (+)
G25956 NA non-coding upstream 62385 43921539 ~ 43924269 (+)
G25934 NA non-coding upstream 282957 43703183 ~ 43703697 (+)
G25925 NA non-coding upstream 312935 43666621 ~ 43673719 (+)
G25914 NA non-coding upstream 342628 43596038 ~ 43644026 (+)
G25893 NA non-coding upstream 469560 43516798 ~ 43517094 (+)
G26039 NA non-coding downstream 109131 44107941 ~ 44202534 (+)
G26043 si:ch211-63o20.7,LOC108439852,LOC108258100,LOC107732427,LOC107698369,LOC107726431,LOC107599081 non-coding downstream 257663 44256473 ~ 44263202 (+)
G26088 NA non-coding downstream 273484 44272294 ~ 44272504 (+)
G26107 LOC108439850 non-coding downstream 321176 44319986 ~ 44323822 (+)
G26121 NA non-coding downstream 365782 44364592 ~ 44367931 (+)
LOC103033920 LOC108416105 other upstream 492338 43490323 ~ 43494316 (+)
G25880 NA other upstream 561748 43424392 ~ 43424906 (+)
G25879 NA other upstream 564608 43421771 ~ 43422046 (+)
rps29 NA other upstream 623210 43360469 ~ 43363444 (+)
LOC103026014 LOC103026014,LOC108411425 other upstream 724555 43259620 ~ 43262099 (+)
fau fau,LOC108411505,LOC107704371 other downstream 2529558 46528368 ~ 46549553 (+)
G26915 NA other downstream 4279457 48278267 ~ 48315894 (+)
G26995 NA other downstream 4556987 48555797 ~ 48641905 (+)
LOC103035773 NA other downstream 4579993 48578803 ~ 48618075 (+)
G27075 NA other downstream 4742404 48741214 ~ 48742439 (+)

Expression


Co-expression Network