LOC111191795


Basic Information

Item Value
gene id LOC111191795
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035899.1
NCBI id CM008302.1
chromosome length 74127438
location 36605539 ~ 36606254 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XR_002649666.1
GTGCCCGGATCGGCTCCAACAGTGGCGTTCGTGTTCCTCAGTCCATCTTTTCCCGTGCATGGACCGGATGGAACGTctcagcgcctctacttcccaGCTACCGgCCTGTTCTACCCCTCTTTCTTTCCCATCGCGTGGGATGACAGGTTCGAGAACTGGGTGTGGCGTCTGCGCAGCCATCTTGCACACCTGTGCTTCTTGGAACTGACCTGGAGACTCTACCTGAAGACCAgGTTTGCCACATCACTGATATACTGATAATAGTAAGaaattatacccttttaaagaaaactaaattttaataatcatagtcttggaaatacatattttttctttacctacTGCAGTCCATACTGTGTTTATGGAGT

Function

GO: NA

KEGG:

id description
ko04913 Ovarian steroidogenesis

RNA

RNA id representative length rna type GC content exon number start site end site
XR_002649666.1 True 368 lncRNA 0.47 3 36605539 36606254

Neighbor

gene id symbol gene type direction distance location
LOC103037324 NA coding upstream 640942 35942095 ~ 35964597 (+)
msn msn,moes,LOC108411308,LOC106567791 coding upstream 681582 35877193 ~ 35923957 (+)
zc3h12b zc3h12b,LOC107557112,LOC107741193,LOC107597257,LOC107672716 coding upstream 755348 35823196 ~ 35850191 (+)
LOC103040467 LOC108444278 coding upstream 795432 35807467 ~ 35810107 (+)
gab3 gab3,LOC107557096 coding upstream 929218 35638347 ~ 35676321 (+)
yipf6 yipf6,LOC107596694,LOC107746343,LOC107757533 coding downstream 5009 36611263 ~ 36619989 (+)
LOC111191796 NA coding downstream 20514 36626768 ~ 36628605 (+)
stard8 stard8 coding downstream 66717 36672971 ~ 36796896 (+)
c3hxorf56 cunhxorf56,cssa13hxorf56,zgc:103697,LOC107548454,LOC107655899,LOC101478835 coding downstream 376928 36983182 ~ 37003775 (+)
eda eda,LOC106603304,LOC107655915,LOC107757537,LOC106567777 coding downstream 831829 37438083 ~ 37490233 (+)
G24037 NA non-coding upstream 51722 36553393 ~ 36553817 (+)
G24034 NA non-coding upstream 89796 36513840 ~ 36515743 (+)
G24012 NA non-coding upstream 118939 36483846 ~ 36486600 (+)
G24031 NA non-coding upstream 133757 36468613 ~ 36471782 (+)
G24030 NA non-coding upstream 137022 36468111 ~ 36468517 (+)
G24041 NA non-coding downstream 15864 36622118 ~ 36623262 (+)
G24046 NA non-coding downstream 193664 36799918 ~ 36800520 (+)
G24047 NA non-coding downstream 194643 36800897 ~ 36802245 (+)
G24069 NA non-coding downstream 284323 36890577 ~ 36895300 (+)
G24144 NA non-coding downstream 404716 37010970 ~ 37013258 (+)
ar ar,LOC108443198 other upstream 146610 36249824 ~ 36458929 (+)
LOC103040783 LOC108411309 other upstream 508813 36043431 ~ 36096726 (+)
trdn NA other upstream 1303192 35226798 ~ 35302347 (+)
cnksr3 cnksr3,LOC108426324,LOC108257645,LOC107560196 other upstream 2641031 33894336 ~ 33964508 (+)
cebpzos cebpzos other upstream 2825636 33777942 ~ 33779903 (+)
LOC111194342 NA other downstream 982852 37589106 ~ 37714382 (+)
G24345 cwc15,LOC107747811,LOC107597228,LOC107732607 other downstream 1322101 37928355 ~ 37933989 (+)
G24390 NA other downstream 1486720 38092974 ~ 38098324 (+)
G24431 NA other downstream 1626339 38232593 ~ 38237041 (+)
G24463 NA other downstream 1753081 38359335 ~ 38382310 (+)

Expression


Co-expression Network