LOC111191945


Basic Information

Item Value
gene id LOC111191945
gene name NA
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035899.1
NCBI id CM008302.1
chromosome length 74127438
location 65849127 ~ 65849762 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>XR_002649741.1
TGCTTCCTCTGTGCAtggtattaattatattaattattatattttctctcaGGAAAGTTCAGCGTGTTGAACGTGTGACTGATGAAGGAGATAGAATGGGCAACGTCTCCTTTGAACAGATACAGTTCTGGATGAGGGTGACAAAGCTTT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_002649741.1 True 150 ncRNA 0.39 2 65849127 65849762

Neighbor

gene id symbol gene type direction distance location
fam20b fam20b,LOC107669149,LOC107712860,LOC107658171 coding upstream 358306 65456737 ~ 65490821 (+)
ralgps2 ralgps2,LOC107739854,LOC107712857,LOC107658172 coding upstream 394819 65247335 ~ 65454308 (+)
LOC103029237 LOC103029237,LOC108414737,LOC107658161,LOC107597864,LOC107669143,LOC107721808 coding upstream 599817 65246531 ~ 65249310 (+)
echdc2 echdc2 coding upstream 624627 65212693 ~ 65224500 (+)
LOC103031359 NA coding upstream 637622 65183357 ~ 65211505 (+)
plpp6 plpp6,LOC107683852,LOC107581521,LOC107669136,LOC107712867,LOC107739850,LOC107597802 coding downstream 5172 65854934 ~ 65862128 (+)
LOC103025553 NA coding downstream 19586 65869348 ~ 65886738 (+)
LOC103024186 LOC108415675 coding downstream 41168 65890930 ~ 65902416 (+)
prrc2c prrc2c,LOC107597798,LOC107581475 coding downstream 58546 65908308 ~ 65931231 (+)
mettl13 mettl13,LOC107712871,LOC107733805 coding downstream 139770 65989532 ~ 66006461 (+)
G30997 prdx6,LOC106584278 non-coding upstream 1980 65837418 ~ 65847147 (+)
G31009 NA non-coding upstream 13848 65833104 ~ 65835279 (+)
G31004 NA non-coding upstream 114418 65734480 ~ 65734709 (+)
G30995 NA non-coding upstream 133350 65715567 ~ 65715777 (+)
G30986 NA non-coding upstream 166454 65677520 ~ 65682673 (+)
G31012 NA non-coding downstream 21436 65871198 ~ 65871687 (+)
G31090 NA non-coding downstream 162420 66012182 ~ 66018251 (+)
G31091 NA non-coding downstream 215591 66065353 ~ 66066097 (+)
G31119 NA non-coding downstream 230142 66079904 ~ 66080258 (+)
G31123 NA non-coding downstream 425404 66275166 ~ 66275599 (+)
G31000 NA other upstream 11762 65828781 ~ 65837365 (+)
trnad-guc_10 NA other upstream 749765 65099291 ~ 65099362 (+)
trnad-guc_9 NA other upstream 750554 65098502 ~ 65098573 (+)
LOC103031672 NA other upstream 762347 65077780 ~ 65086780 (+)
LOC103033886 LOC108257901,LOC105910874 other upstream 802149 65022419 ~ 65046978 (+)
G31355 NA other downstream 1364543 67214305 ~ 67215186 (+)
LOC103027733 NA other downstream 1633573 67483335 ~ 67506898 (+)
G31407 NA other downstream 1647441 67497203 ~ 67497697 (+)
hmcn1 hmcn1,LOC107698379,LOC107732365,LOC106560561 other downstream 1841679 67691441 ~ 67844634 (+)
LOC103035359 erh,ERH,LOC107580641,LOC105904210,LOC106607637 other downstream 2170278 68020040 ~ 68022940 (+)

Expression


Co-expression Network