Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC111196213 |
| gene name | NA |
| gene type | non-coding |
| species | mexican tetra (Astyanax mexicanus) |
| category of species | ornamental fish |
| Item | Value |
|---|---|
| chromosome id | NC_035899.1 |
| NCBI id | CM008302.1 |
| chromosome length | 74127438 |
| location | 39472824 ~ 39480344 (-) |
| genome version | Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XR_002652028.1 | True | 291 | lncRNA | 0.42 | 3 | 39472824 | 39480344 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC103041222 | NA | coding | downstream | 18939 | 39441070 ~ 39453885 (-) |
| rad51 | rad51 | coding | downstream | 33781 | 39431663 ~ 39439043 (-) |
| zc3h14 | zc3h14,LOC102797374 | coding | downstream | 63906 | 39399006 ~ 39408918 (-) |
| tmed10 | tmed10 | coding | downstream | 85332 | 39382200 ~ 39387492 (-) |
| LOC103042954 | NA | coding | downstream | 111389 | 39356694 ~ 39361435 (-) |
| LOC103039762 | flvcr2b,LOC108432874,LOC103039762,LOC108242486,LOC108255188,LOC107697188 | coding | upstream | 45677 | 39526021 ~ 39557879 (-) |
| LOC103039151 | LOC103039151,LOC108432876 | coding | upstream | 82822 | 39563166 ~ 39565797 (-) |
| LOC103033783 | LOC103033783 | coding | upstream | 106139 | 39586483 ~ 39587636 (-) |
| LOC103033459 | LOC103033783 | coding | upstream | 112091 | 39592435 ~ 39593599 (-) |
| LOC111191800 | LOC108432802,LOC108432823,LOC108432818 | coding | upstream | 114692 | 39595036 ~ 39596254 (-) |
| LOC111191798 | NA | non-coding | downstream | 263559 | 39207480 ~ 39209265 (-) |
| G24860 | NA | non-coding | downstream | 284546 | 39187782 ~ 39188278 (-) |
| G24839 | cf166,LOC103047239,LOC105017858,LOC100499587 | non-coding | downstream | 319373 | 39147559 ~ 39153451 (-) |
| G24843 | NA | non-coding | downstream | 414258 | 39058005 ~ 39058566 (-) |
| G24842 | NA | non-coding | downstream | 414923 | 39057567 ~ 39057901 (-) |
| G24911 | NA | non-coding | upstream | 18699 | 39499043 ~ 39499466 (-) |
| LOC111196215 | NA | non-coding | upstream | 34125 | 39514469 ~ 39524274 (-) |
| G24964 | NA | non-coding | upstream | 244111 | 39724455 ~ 39732479 (-) |
| G24992 | NA | non-coding | upstream | 338932 | 39819276 ~ 39825981 (-) |
| G24997 | NA | non-coding | upstream | 365029 | 39845373 ~ 39848209 (-) |
| G24903 | NA | other | downstream | 14635 | 39455236 ~ 39458189 (-) |
| LOC103043888 | LOC108432835 | other | downstream | 125908 | 39273635 ~ 39346916 (-) |
| batf | batf,LOC107697118 | other | downstream | 148122 | 39309726 ~ 39324702 (-) |
| smim8 | smim8 | other | downstream | 545831 | 38925623 ~ 38926993 (-) |
| LOC103024598 | LOC108411439 | other | downstream | 549907 | 38887626 ~ 38922917 (-) |
| LOC111196341 | NA | other | upstream | 694918 | 40175262 ~ 40230868 (-) |
| G25265 | slco5a1 | other | upstream | 1734077 | 41214421 ~ 41218829 (-) |
| arhgap11a | NA | other | upstream | 1955697 | 41436041 ~ 41442494 (-) |
| LOC111196508 | NA | other | upstream | 2375751 | 41856095 ~ 41865844 (-) |
| LOC111196586 | LOC108262118 | other | upstream | 2388680 | 41869024 ~ 41880424 (-) |
