trnad-guc


Basic Information

Item Value
gene id trnad-guc
gene name NA
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035899.1
NCBI id CM008302.1
chromosome length 74127438
location 61693213 ~ 61693284 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>trnad-guc
TCCTCGTTAGTATAGTGGACAGTATCTCCGCCTGTCACGCGGAAGACCGGGGTTCGATTCCCCGACGGGGAG

Function

GO: NA

KEGG:

id description
ko03040 Spliceosome

RNA

RNA id representative length rna type GC content exon number start site end site
trnad-guc True 72 tRNA 0.60 1 61693213 61693284

Neighbor

gene id symbol gene type direction distance location
LOC103031412 NA coding upstream 529615 60994927 ~ 61163598 (+)
brf1 brf1,brf1b,LOC107701485,LOC107718407,LOC107683968 coding upstream 899383 60703082 ~ 60793830 (+)
ppp1r13b ppp1r13bb,LOC108434983 coding upstream 1093847 60532742 ~ 60599366 (+)
rd3l rd3l coding upstream 1202248 60485903 ~ 60490965 (+)
LOC103036511 rtn1b,LOC108434986,LOC107560379,LOC108257846,LOC105897731,LOC107589072 coding upstream 1231165 60395578 ~ 60462048 (+)
l3hypdh l3hypdh,LOC107684001 coding downstream 671 61693955 ~ 61704828 (+)
trnad-guc_1 NA coding downstream 3516 61696800 ~ 61696871 (+)
LOC103031223 NA coding downstream 257187 61950471 ~ 61983459 (+)
LOC103029839 psma8,LOC103029839,LOC107572146,LOC100304914,LOC107723426 coding downstream 291355 61984639 ~ 61990664 (+)
LOC103033766 LOC103033766,LOC108416260 coding downstream 1098464 62791748 ~ 62793588 (+)
G29921 NA non-coding upstream 309379 61367274 ~ 61383834 (+)
G29916 jag2,jag2b,LOC106571712,LOC107718403 non-coding upstream 383370 61307219 ~ 61309843 (+)
G29825 NA non-coding upstream 762636 60929122 ~ 60930577 (+)
G29812 NA non-coding upstream 865273 60827737 ~ 60827940 (+)
G29775 xrcc3 non-coding upstream 991090 60700345 ~ 60702123 (+)
G29972 NA non-coding downstream 209479 61902763 ~ 61902969 (+)
G29974 NA non-coding downstream 213299 61906583 ~ 61907066 (+)
G29963 NA non-coding downstream 215419 61908703 ~ 61917624 (+)
G29976 NA non-coding downstream 219780 61913064 ~ 61915152 (+)
G29977 NA non-coding downstream 244380 61937664 ~ 61937976 (+)
c3h14orf2 NA other upstream 1168162 60520342 ~ 60525051 (+)
nme6 nme6 other upstream 2094881 59586709 ~ 59598332 (+)
atraid atraid other upstream 2133451 59554285 ~ 59559762 (+)
LOC111194375 NA other upstream 2464373 59221266 ~ 59228840 (+)
G29382 NA other upstream 2472177 59220532 ~ 59221036 (+)
LOC103046322 clic5b,LOC108411995,LOC107678823,LOC107726746,LOC105897798,LOC103355727,LOC108258161,LOC107743284 other downstream 232796 61926080 ~ 61936083 (+)
LOC103045797 NA other downstream 1128459 62821743 ~ 62853288 (+)
LOC103035278 NA other downstream 1232734 62926018 ~ 62931133 (+)
G30362 NA other downstream 1642450 63335734 ~ 63345693 (+)
kit kit other downstream 2537960 64231244 ~ 64269695 (+)

Expression


Co-expression Network