trnae-uuc_2


Basic Information

Item Value
gene id trnae-uuc_2
gene name NA
gene type misc
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035899.1
NCBI id CM008302.1
chromosome length 74127438
location 53623182 ~ 53623253 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>trnae-uuc_2
TCCCATATGGTCTAGCGGTTAGGATTCCTGGTTTTCACCCAGGCGGCCCGGGTTCAACTCCCGGTATGGGAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
trnae-uuc_2 True 72 tRNA 0.58 1 53623182 53623253

Neighbor

gene id symbol gene type direction distance location
LOC103041583 LOC108417958 coding upstream 793898 52825184 ~ 52829284 (+)
LOC111188773 LOC108417958 coding upstream 806688 52811053 ~ 52816494 (+)
LOC103033541 LOC108413844,LOC108417958 coding upstream 833813 52785659 ~ 52789369 (+)
LOC111188745 NA coding upstream 841318 52769242 ~ 52781864 (+)
LOC103032675 kcnk10a,LOC103032675,LOC108413877,LOC107664828,LOC107582110,LOC107740298,LOC107747370,LOC107668129,LOC105017581 coding upstream 1013361 52574938 ~ 52609821 (+)
epb41l2 epb41l2,LOC107560489,LOC106571359,LOC100380760 coding downstream 340309 53963562 ~ 54049416 (+)
scara5 scara5,LOC104952888 coding downstream 644131 54267384 ~ 54399891 (+)
LOC103031746 NA coding downstream 810470 54433723 ~ 54455524 (+)
LOC103038902 gopc,LOC107743304,LOC107727658,LOC107697149 coding downstream 1042155 54665408 ~ 54689752 (+)
tdrd15 NA coding downstream 1204371 54827624 ~ 54843995 (+)
G27935 NA non-coding upstream 9175 53613777 ~ 53614007 (+)
G27923 NA non-coding upstream 45984 53576776 ~ 53577198 (+)
G27917 NA non-coding upstream 87957 53534600 ~ 53535225 (+)
G27903 NA non-coding upstream 118758 53499475 ~ 53504424 (+)
G27875 NA non-coding upstream 292405 53327872 ~ 53330777 (+)
G27962 NA non-coding downstream 51335 53674588 ~ 53675007 (+)
G27964 NA non-coding downstream 64446 53687699 ~ 53689734 (+)
G27966 med23 non-coding downstream 68473 53691726 ~ 53693741 (+)
G27972 med23 non-coding downstream 72697 53695950 ~ 53696768 (+)
G27984 med23 non-coding downstream 90512 53713765 ~ 53715952 (+)
trnah-gug NA other upstream 288 53622823 ~ 53622894 (+)
LOC111188765 glrx5,LOC106571612 other upstream 854206 52760113 ~ 52768976 (+)
G27729 LOC103457336,LOC100194557,LOC103359577 other upstream 1167018 52454431 ~ 52456164 (+)
G27683 LOC108412685 other upstream 1308916 52314025 ~ 52314266 (+)
dsel dsel,LOC108411752,LOC105896186,LOC106590194 other upstream 1532549 52083282 ~ 52090633 (+)
trnar-acg NA other downstream 196 53623449 ~ 53623521 (+)
trnam-cau_5 NA other downstream 364 53623617 ~ 53623689 (+)
trnah-gug_1 NA other downstream 815 53624068 ~ 53624139 (+)
trnae-uuc_3 NA other downstream 1174 53624427 ~ 53624498 (+)
trnar-acg_1 NA other downstream 1441 53624694 ~ 53624766 (+)

Expression


Co-expression Network