CI01000010_00808732_00810151



Basic Information


Item Value
gene id CI01000010_00808732_00810151
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information


Item Value
chromosome id CI01000010
NCBI id null
chromosome length 12265998
location 808732 ~ 810331 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence


>CI01000010_00808732_00810151.mRNA
ATGGTCGAAACAAAAGAAGTTTCAGCCACAGAGCCAGTTTCAGCCACGGAGCAAATGACAAAATTCATCTGGTCACCAAAGGGGATGATTTTAGCTATTGAAATTGCTCTATGTCTCATTGTGATTATTTGTAAAGCAGTCTCTTCTGATTGCTACTTGTGGTGCCCCATTATAGAGCTGGTCTGGGCCTTTATCATCTTCATCATTTATGGCATGGAACTGCAGATACGGGCATTGCCATGGACGGACTTCTTCAGAGCAATCACAGCCTCACTCACCTTACTCATTACTTCTATTATCTGCATTAGCTGGGCATTGAGAAGTTCTGGGGAAGTTGCTGGTTCGATTTTTGGTTTGCTGGCAGCAGCAGTGTTCGGATATGATACTTTTGCCATAATGAAATACATCAAGGAACTGAAAGAGCAGGGGGGAAATATTAATTTCATTTTGATATAAACATTGGAAAAAATGGAATACGACAGGAGCTCATAAAGTTTCCACAAATGTTTATTATTGCTTTTTTTTCTATTCTCTTTTTTTTTTTTTTTTTGGTCATTTCATGTTTAAATGTAAAAGTCTAAATGTGAAATTGAATGATGACATTTTACAATTCAATGCACTTCACATGTTATGCCA

Function


NR:

description
novel protein

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
CI01000010_00808732_00810151.mRNA True 636 mRNA 0.37 5 808732 810331

Neighbor


gene id symbol gene type direction distance location
CI01000010_00797362_00800297 SYP, SYPA coding upstream 8431 797362 ~ 800301 (+)
CI01000010_00746445_00783522 CACNA1FB, CACNA1F coding upstream 25210 746445 ~ 783522 (+)
CI01000010_00588108_00595271 PDZD4 coding upstream 213270 587629 ~ 595462 (+)
CI01000010_00529313_00531098 NA coding upstream 277504 529313 ~ 531228 (+)
CI01000010_00504866_00514962 NA coding upstream 292758 504866 ~ 515974 (+)
CI01000010_00826648_00831638 NA coding downstream 16317 826648 ~ 832705 (+)
CI01000010_00841791_00854049 UCKL1A, UCKL1B, UCKL1 coding downstream 31460 841791 ~ 854239 (+)
CI01000010_00881905_00883563 NA coding downstream 70864 881195 ~ 883684 (+)
CI01000010_00886120_00889930 NA coding downstream 75560 885891 ~ 889959 (+)
CI01000010_00892258_00898466 YTHDF1 coding downstream 81927 892258 ~ 898554 (+)
G60817 NA non-coding upstream 19306 788888 ~ 789426 (+)
G60801 NA non-coding upstream 72723 727837 ~ 736009 (+)
G60780 NA non-coding upstream 130625 673066 ~ 678107 (+)
G60693 NA non-coding upstream 211637 596824 ~ 597095 (+)
G60745 NA non-coding upstream 240800 567603 ~ 567932 (+)
G60852 NA non-coding downstream 138526 948857 ~ 959047 (+)
G60915 NA non-coding downstream 208686 1019017 ~ 1019485 (+)
G61218 NA non-coding downstream 439914 1250245 ~ 1250446 (+)
G61220 NA non-coding downstream 442005 1252336 ~ 1252899 (+)
G61219 NA non-coding downstream 442737 1253068 ~ 1253739 (+)
CI01000010_00946586_00947327 NA other downstream 134851 945182 ~ 947577 (+)
CI01000010_03197380_03199958 NA other downstream 2383824 3197380 ~ 3200044 (+)
CI01000010_03320340_03346243 NA other downstream 2503364 3313695 ~ 3347796 (+)

Expression



Co-expression Network