trnal-cag_3


Basic Information

Item Value
gene id trnal-cag_3
gene name NA
gene type misc
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035899.1
NCBI id CM008302.1
chromosome length 74127438
location 53649963 ~ 53650045 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>trnal-cag_3
GTCAGgatggccgagcggtctaaggcgctgcgtTCAGGTCGCAGTCTCCTCTGGAggcgtgggttcgaatcccacttctgaca

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
trnal-cag_3 True 83 tRNA 0.61 1 53649963 53650045

Neighbor

gene id symbol gene type direction distance location
LOC103041583 LOC108417958 coding upstream 820679 52825184 ~ 52829284 (+)
LOC111188773 LOC108417958 coding upstream 833469 52811053 ~ 52816494 (+)
LOC103033541 LOC108413844,LOC108417958 coding upstream 860594 52785659 ~ 52789369 (+)
LOC111188745 NA coding upstream 868099 52769242 ~ 52781864 (+)
LOC103032675 kcnk10a,LOC103032675,LOC108413877,LOC107664828,LOC107582110,LOC107740298,LOC107747370,LOC107668129,LOC105017581 coding upstream 1040142 52574938 ~ 52609821 (+)
epb41l2 epb41l2,LOC107560489,LOC106571359,LOC100380760 coding downstream 313517 53963562 ~ 54049416 (+)
scara5 scara5,LOC104952888 coding downstream 617339 54267384 ~ 54399891 (+)
LOC103031746 NA coding downstream 783678 54433723 ~ 54455524 (+)
LOC103038902 gopc,LOC107743304,LOC107727658,LOC107697149 coding downstream 1015363 54665408 ~ 54689752 (+)
tdrd15 NA coding downstream 1177579 54827624 ~ 54843995 (+)
G27935 NA non-coding upstream 35956 53613777 ~ 53614007 (+)
G27923 NA non-coding upstream 72765 53576776 ~ 53577198 (+)
G27917 NA non-coding upstream 114738 53534600 ~ 53535225 (+)
G27903 NA non-coding upstream 145539 53499475 ~ 53504424 (+)
G27875 NA non-coding upstream 319186 53327872 ~ 53330777 (+)
G27962 NA non-coding downstream 24543 53674588 ~ 53675007 (+)
G27964 NA non-coding downstream 37654 53687699 ~ 53689734 (+)
G27966 med23 non-coding downstream 41681 53691726 ~ 53693741 (+)
G27972 med23 non-coding downstream 45905 53695950 ~ 53696768 (+)
G27984 med23 non-coding downstream 63720 53713765 ~ 53715952 (+)
trnas-cga_5 NA other upstream 108 53649774 ~ 53649855 (+)
trnas-cga_4 NA other upstream 293 53649589 ~ 53649670 (+)
trnal-cag_2 NA other upstream 827 53649054 ~ 53649136 (+)
trnal-cag_1 NA other upstream 1203 53648678 ~ 53648760 (+)
trnas-uga_7 NA other upstream 1394 53648488 ~ 53648569 (+)
trnal-cag_4 NA other downstream 293 53650338 ~ 53650420 (+)
trnal-cag_5 NA other downstream 668 53650713 ~ 53650795 (+)
trnas-uga_8 NA other downstream 835 53650880 ~ 53650961 (+)
trnas-aga_6 NA other downstream 1021 53651066 ~ 53651147 (+)
trnas-uga_9 NA other downstream 1902 53651947 ~ 53652028 (+)

Expression


Co-expression Network