trnal-cag_5


Basic Information

Item Value
gene id trnal-cag_5
gene name NA
gene type misc
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035899.1
NCBI id CM008302.1
chromosome length 74127438
location 53650713 ~ 53650795 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>trnal-cag_5
GTCAGgatggccgagcggtctaaggcgctgcgtTCAGGTCGCAGTCTCCTCTGGAggcgtgggttcgaatcccacttctgaca

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
trnal-cag_5 True 83 tRNA 0.61 1 53650713 53650795

Neighbor

gene id symbol gene type direction distance location
LOC103041583 LOC108417958 coding upstream 821429 52825184 ~ 52829284 (+)
LOC111188773 LOC108417958 coding upstream 834219 52811053 ~ 52816494 (+)
LOC103033541 LOC108413844,LOC108417958 coding upstream 861344 52785659 ~ 52789369 (+)
LOC111188745 NA coding upstream 868849 52769242 ~ 52781864 (+)
LOC103032675 kcnk10a,LOC103032675,LOC108413877,LOC107664828,LOC107582110,LOC107740298,LOC107747370,LOC107668129,LOC105017581 coding upstream 1040892 52574938 ~ 52609821 (+)
epb41l2 epb41l2,LOC107560489,LOC106571359,LOC100380760 coding downstream 312767 53963562 ~ 54049416 (+)
scara5 scara5,LOC104952888 coding downstream 616589 54267384 ~ 54399891 (+)
LOC103031746 NA coding downstream 782928 54433723 ~ 54455524 (+)
LOC103038902 gopc,LOC107743304,LOC107727658,LOC107697149 coding downstream 1014613 54665408 ~ 54689752 (+)
tdrd15 NA coding downstream 1176829 54827624 ~ 54843995 (+)
G27935 NA non-coding upstream 36706 53613777 ~ 53614007 (+)
G27923 NA non-coding upstream 73515 53576776 ~ 53577198 (+)
G27917 NA non-coding upstream 115488 53534600 ~ 53535225 (+)
G27903 NA non-coding upstream 146289 53499475 ~ 53504424 (+)
G27875 NA non-coding upstream 319936 53327872 ~ 53330777 (+)
G27962 NA non-coding downstream 23793 53674588 ~ 53675007 (+)
G27964 NA non-coding downstream 36904 53687699 ~ 53689734 (+)
G27966 med23 non-coding downstream 40931 53691726 ~ 53693741 (+)
G27972 med23 non-coding downstream 45155 53695950 ~ 53696768 (+)
G27984 med23 non-coding downstream 62970 53713765 ~ 53715952 (+)
trnal-cag_4 NA other upstream 293 53650338 ~ 53650420 (+)
trnal-cag_3 NA other upstream 668 53649963 ~ 53650045 (+)
trnas-cga_5 NA other upstream 858 53649774 ~ 53649855 (+)
trnas-cga_4 NA other upstream 1043 53649589 ~ 53649670 (+)
trnal-cag_2 NA other upstream 1577 53649054 ~ 53649136 (+)
trnas-uga_8 NA other downstream 85 53650880 ~ 53650961 (+)
trnas-aga_6 NA other downstream 271 53651066 ~ 53651147 (+)
trnas-uga_9 NA other downstream 1152 53651947 ~ 53652028 (+)
trnal-cag_6 NA other downstream 1340 53652135 ~ 53652217 (+)
trnas-uga_10 NA other downstream 1713 53652508 ~ 53652589 (+)

Expression


Co-expression Network