trnal-cag_6


Basic Information

Item Value
gene id trnal-cag_6
gene name NA
gene type misc
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035899.1
NCBI id CM008302.1
chromosome length 74127438
location 53652135 ~ 53652217 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>trnal-cag_6
GTCAGgatggccgagcggtctaaggcgctgcgtTCAGGTCGCAGTCTCCTCTGGAggcgtgggttcgaatcccacttctgaca

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
trnal-cag_6 True 83 tRNA 0.61 1 53652135 53652217

Neighbor

gene id symbol gene type direction distance location
LOC103041583 LOC108417958 coding upstream 822851 52825184 ~ 52829284 (+)
LOC111188773 LOC108417958 coding upstream 835641 52811053 ~ 52816494 (+)
LOC103033541 LOC108413844,LOC108417958 coding upstream 862766 52785659 ~ 52789369 (+)
LOC111188745 NA coding upstream 870271 52769242 ~ 52781864 (+)
LOC103032675 kcnk10a,LOC103032675,LOC108413877,LOC107664828,LOC107582110,LOC107740298,LOC107747370,LOC107668129,LOC105017581 coding upstream 1042314 52574938 ~ 52609821 (+)
epb41l2 epb41l2,LOC107560489,LOC106571359,LOC100380760 coding downstream 311345 53963562 ~ 54049416 (+)
scara5 scara5,LOC104952888 coding downstream 615167 54267384 ~ 54399891 (+)
LOC103031746 NA coding downstream 781506 54433723 ~ 54455524 (+)
LOC103038902 gopc,LOC107743304,LOC107727658,LOC107697149 coding downstream 1013191 54665408 ~ 54689752 (+)
tdrd15 NA coding downstream 1175407 54827624 ~ 54843995 (+)
G27935 NA non-coding upstream 38128 53613777 ~ 53614007 (+)
G27923 NA non-coding upstream 74937 53576776 ~ 53577198 (+)
G27917 NA non-coding upstream 116910 53534600 ~ 53535225 (+)
G27903 NA non-coding upstream 147711 53499475 ~ 53504424 (+)
G27875 NA non-coding upstream 321358 53327872 ~ 53330777 (+)
G27962 NA non-coding downstream 22371 53674588 ~ 53675007 (+)
G27964 NA non-coding downstream 35482 53687699 ~ 53689734 (+)
G27966 med23 non-coding downstream 39509 53691726 ~ 53693741 (+)
G27972 med23 non-coding downstream 43733 53695950 ~ 53696768 (+)
G27984 med23 non-coding downstream 61548 53713765 ~ 53715952 (+)
trnas-uga_9 NA other upstream 107 53651947 ~ 53652028 (+)
trnas-aga_6 NA other upstream 988 53651066 ~ 53651147 (+)
trnas-uga_8 NA other upstream 1174 53650880 ~ 53650961 (+)
trnal-cag_5 NA other upstream 1340 53650713 ~ 53650795 (+)
trnal-cag_4 NA other upstream 1715 53650338 ~ 53650420 (+)
trnas-uga_10 NA other downstream 291 53652508 ~ 53652589 (+)
trnas-aga_7 NA other downstream 640 53652857 ~ 53652938 (+)
trnas-aga_8 NA other downstream 1432 53653649 ~ 53653730 (+)
G28072 NA other downstream 726024 54378241 ~ 54379306 (+)
LOC103023616 LOC108424481,LOC108257757 other downstream 1728387 55380604 ~ 55403330 (+)

Expression


Co-expression Network