CI01000010_00810923_00813645


Basic Information

Item Value
gene id CI01000010_00810923_00813645
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000010
NCBI id null
chromosome length 12265998
location 810447 ~ 813870 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000010_00810923_00813645.mRNA
ATACATGCAATTAATGTTTGTATAATAAAATAGACTTTAGCTCACAGATTTAGCTCATTTTGACACCCGGCCTGTTTTTACAGGTATCGCACGTACTACAAGCCTATGTATAAAGTTGCCTAGAAGACTCTGACTGAGCTGGAGTGGAAGTGCTGTCCTGGATATGCAGGTGTCGGTTGCACTGCGGTATATGGAATGAAAGCAAGGCCCCTATTCAAAGGACCAATGCCTGCACAGAAGGATCCGATTCCTCATTTTAAAGGTCCCATGCCTATGCAGAAGGGCCCTATGCCTCCATTTAAAGGGCCCATGCCTATGCAGAAGGGCCCTATGCCTCCATTTAAAGGGCCCATGCCTATACAGAAGGGCCCTATGCCTCCATTTAAAGGGCCCATCCCTGCACAGAAGGGTCCCATGCCTTCTTTTAAAGGGCCTATGCAGAAGGGTCCCATGCCTTCTTTTAAAAGGCCTATGCCTACACAAAAGGGTCCAGTGCCTTCTTTTAAAGGTTCCAAACCCTCTCAAAAGGCTTCATTTAAAGGGCAGTTTCCTCATCCCCACTTTAATGGAAACCCCTGGAATCAACCTCAACCACCGTCTAATGGCATGAATGGATACCCAGGCCCTAATACTGGACCCTCTTCCCAAGATGCCTCAGTTGAACCTTATCCAGACCACCAAGAACCGGAAGTAGATTATCCTGAACCCATGCCAGAGCCTCAAGATCTTGGCCTTGATTTAATCCCAAGAGAGAATGAGCCAATCACAGGCTACCAGGATCCTCAGCCAGATCGCCATGGTTCTATATCAGAGCACAGTGAGACAGAGCCTGTTTCCAATGCACGGGCGCCCTCTGGTGGTAGTGAAACAAACCAAGGTCATGATGACAACATTATTGAAGATGAGCGGTTGGGTAGGATAGAAGAGGATGTGCAGCGACTCTTTCTTGGTCTTGAGACTCTCCGTGGTACAGTGACAGGTATGGAGGACAGTTTGCGTGCTTCCCTCCGTGAAGATGCCAACCGGATGTTGACTGCACTTATTTCTGCAGCACCTAGCCCTATTGCTGCTCCTTCCCTGTCCAGGGACTCTTCTGTGGGTTTCGGAGATCTTCCTGGAGGTGCACCGGATATTGAGGGTTCAGATGTGGTGGGACAGTTCCCAAACTTGGTCGATTTAGCTGAAAAGGTTTCAGAGCTGCGAGCAGAGCTTCTGGCAAAGGCATCTGAGCTGGAAGAGATAAGAGGAGCAGTCATGGGTCACAACAACACCCTTCAAAGACTGTCAGATGGGTCAGTGAATATTACTCAAACTAACTTCCAAAAGGCCCTGGAGAAAATAGTGGAGTCCAAAATGAGTGAAGCTCGGGTGGCCATCTTAGATGGCTTTGAAAAACGTGTGGAGAGTGCTGAGGACCGATGCGAGGGTCGCATGGCAGAGGTGCGGCTCCAGTGCAAGGAAGAACTTTTGAATGGACAAGATCAGATTGAGCAAGTCCTAGACATAAGGGCCGTAGGATTGAGGACAGAACTCCAAAAACTTCAGGCTCAACTTCAAGACCTGGAGCCTGAAGAGGGTTGTTGCATTGCTGTATCAGGTCTAACTGAAAGGCTAATTCTTGTTGAGCAGTCAGTGGGTGGCTTGAATGAGTCCCAAATACACCTACGTGCCGAACTTGGTGGACACAAGGACCATATAGAGGGCATGTTGGAGGGCCGACTGGCTTATGTGGAATCCAAGATGAATATTGCATTGAATCAAGAGGAAGCAAACATTAACAAAAGAGTGCCCACCGACCTGGAGGCGCAGTTAGAGGGGAAGCTTAAAGCTCTTGAAAGTCGTCTCTTGGCTGCAGTGGAGGAGCTAGGTAATGTCACAGCACCAACTTTGCTAGAGGGTCAGGCTGTGCCCACAATGGAGACAGATATAGAATCACTCAGAAGAAGTGTTGAGGACGATTTGGACCGTTTACAGGAACAGCTTAAATCCATAGAGGTTATGTGCACTTCATCTTGTGTTCCACAACCTGTTCTTACAGGATATGCAGCTCCTCTGGCAAATAAGGAGGATAAAATTGAGGACAACCACAAGGAACTGAACGGGAAACTTGATTTACAAGTAGAGAGATTGAATAACCTCAATGCCACACTATATAATCTTCTTGTCCAGTTGGCAGAGAAACAGGAGGTAGGTCTTCAGGGTGAGGTGACCCTACTGAAAGTTAGTGTGAACTCCGTTAACAGATCGCTCTGTGGCTTGCAAGAGTCTCTTGGCTCTGTGATCAGAGAGGTCAGTCACACCAACCTTACCTGGCAAGAGAGAGAAGAAAGGCTTGCACAGCAAGTGAAGGGTGTGGTTCAGCTGGTGGGGCGACAGGCATCTATGCTGGGTACTGGGGAGCGAAAGTTGACCCGTCTGAAAGGAGAACTTCAGGATCTGCGGCGGAGAGTGGCCGGAGAGCTTCAGGGTTGCCGCTCCACTGCCCTGGGTGTCCAGAAGGAGGTAAATGAAGTCGGGGGTCGTGTTGCCCGTGTGGAGGGTCAGTGTGGAGGGCTGGCACACCTGGCTGATGACCTAGAGAGAATTCGAGGAGAGCTAGAAAGGCACTCTGATGGGTATTTGTCTCATGTAAATAGCACCCTTGTTAACCATTCTCACCAGCTGTCCGAGCTCAGAGATAGCATTCAAAACTGCACTGGATCATCTGGGTCTACTAGGAAAGCCGGGGACAGTATAGCTACAACACAACAAATGGAAGAACAACAAACAACACAACCAGCCCATCCCAGAGGAGACCAGTTTGCAGTTCCCACACAGCACAGAGGTGACTAGTAATTCAAGTGCACTTTATAATGTTAAGACAGTCTATACTCAAGACATATACTATTATATAGTATCTTTCTAAGGAGGCTAGTCTCTTACCAACATCTGTTGTATGATCAGTATTGTTGAAATTCACTCTTCCCAGTCTGTGGTGTTGCTGTATTGTATTGTTGCTGTCTTTTTAATCACTTGTCAATTATATATATATATTTTTAAAAAACTTTTTCTTAGCAGTTTTAGGGTTGATAGGTTTATTCATTGTCTTACTATGTTCTTGTGAATATTTTTTATATAAATTGGATGTCTGACTTTGCAAATGTTTTTATTGTAGGGCTTTTTAAATGAAAGAGACTGTTGTTCAACATTTCTGGAACATGCTTCAATGACTTTTGTGAATTTTTGACTTTTTTTTTGTTACCTCTTTGTACTTTTTGTGTTTGTACCTTTATACTGTGTATGGTTTGTGAAAGATGGTTCTTAATAAA

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000010_00810923_00813645.mRNA True 3308 mRNA 0.46 2 810447 813870

Neighbor

gene id symbol gene type direction distance location
CI01000010_00691767_00731442 MAGIXA, MAGIX coding downstream 79005 691767 ~ 731442 (-)
CI01000010_00653231_00678240 NA coding downstream 130754 653185 ~ 679693 (-)
CI01000010_00601570_00615159 IQSEC2 coding downstream 195288 601570 ~ 615159 (-)
CI01000010_00553512_00562038 NA coding downstream 248409 553413 ~ 562038 (-)
CI01000010_00532752_00544586 CSDE1 coding downstream 265861 532617 ~ 544586 (-)
CI01000010_00861290_00870510 NA coding upstream 46610 860480 ~ 871146 (-)
CI01000010_00902754_00903080 NA coding upstream 88647 902517 ~ 903230 (-)
CI01000010_00929453_00930078 NA coding upstream 115191 929061 ~ 930537 (-)
CI01000010_00952202_00958971 PTK6 coding upstream 138022 951892 ~ 959383 (-)
CI01000010_00964665_01011716 NOL4L, NOL4LA coding upstream 150440 964310 ~ 1011716 (-)
G61105 NA non-coding downstream 5085 805070 ~ 805362 (-)
G61104 NA non-coding downstream 6035 804195 ~ 804412 (-)
G61098 NA non-coding downstream 20957 789195 ~ 789490 (-)
G61075 NA non-coding downstream 26925 780807 ~ 783522 (-)
G61043 NA non-coding downstream 213762 596126 ~ 596685 (-)
G61115 NA non-coding upstream 24592 838462 ~ 840123 (-)
G61117 NA non-coding upstream 26891 840761 ~ 844440 (-)
G61127 NA non-coding upstream 72071 885941 ~ 890832 (-)
G61085 NA non-coding upstream 78457 892327 ~ 932153 (-)
G61076 NA non-coding upstream 131338 945208 ~ 947575 (-)
G61045 NA other downstream 234936 572753 ~ 575511 (-)
G61888 NA other upstream 430599 1244469 ~ 1246018 (-)
G61965 NA other upstream 610555 1424425 ~ 1545051 (-)
CI01000010_03527436_03530341 NA other upstream 2715800 3527408 ~ 3530359 (-)
CI01000010_03890095_03899058 SSBP3B, SSBP3, SSBP2 other upstream 3076199 3890069 ~ 3899058 (-)
G64237 NA other upstream 3416080 4229950 ~ 4236416 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location