trnal-cag_8


Basic Information

Item Value
gene id trnal-cag_8
gene name NA
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035899.1
NCBI id CM008302.1
chromosome length 74127438
location 59198202 ~ 59198284 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>trnal-cag_8
GTTAGGATGGCCGAGCGGTCTATGGCGCTGCGTTCAGGTCGCAGTCTCCTCTGGAggcgtgggttcgaatcccacttCTAACA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
trnal-cag_8 True 83 tRNA 0.59 1 59198202 59198284

Neighbor

gene id symbol gene type direction distance location
sox7 sox7,LOC107701473,LOC107561931,LOC107589052,LOC107684791 coding upstream 14169 59180645 ~ 59184033 (+)
pinx1 pinx1 coding upstream 29704 59139580 ~ 59168498 (+)
LOC103024478 tdh,LOC103024478,LOC108435012,LOC107723287,LOC107561940,LOC107589050,LOC107701506,LOC107746115 coding upstream 74625 59115439 ~ 59123577 (+)
LOC103022804 LOC108435018 coding upstream 234539 58954101 ~ 58963663 (+)
LOC103022293 eif5,if5,LOC103022293,LOC108435020,LOC107723356,LOC106610956 coding upstream 263411 58925376 ~ 58934791 (+)
LOC111194376 NA coding downstream 30560 59228844 ~ 59230388 (+)
LOC111194377 NA coding downstream 41712 59239996 ~ 59243400 (+)
LOC103025639 blk,LOC108435007,LOC108258139,LOC107589086,LOC107684815,LOC107746144,LOC107701472,LOC107561930 coding downstream 53689 59251973 ~ 59275534 (+)
fndc4 fndc4,LOC107589087,LOC107723530,LOC107697298 coding downstream 99397 59297681 ~ 59353125 (+)
LOC103030186 LOC108435004 coding downstream 289877 59488161 ~ 59503522 (+)
G29304 ccm2,LOC107684794 non-coding upstream 218505 58976662 ~ 58979697 (+)
G29299 enpp5 non-coding upstream 249622 58935011 ~ 58948580 (+)
LOC111191936 NA non-coding upstream 302862 58888723 ~ 58895340 (+)
G29290 NA non-coding upstream 309853 58888118 ~ 58888349 (+)
G29276 NA non-coding upstream 337375 58860500 ~ 58860827 (+)
G29383 NA non-coding downstream 21292 59219576 ~ 59219829 (+)
G29388 NA non-coding downstream 38212 59236496 ~ 59243834 (+)
G29405 NA non-coding downstream 78323 59276607 ~ 59276837 (+)
G29409 NA non-coding downstream 114318 59312602 ~ 59312912 (+)
G29432 NA non-coding downstream 237876 59436160 ~ 59436375 (+)
mtmr9 mtmr9,LOC107746110,LOC107701508,LOC107723304 other upstream 85887 59064473 ~ 59112315 (+)
G29155 foxq1 other upstream 779385 58417394 ~ 58418817 (+)
LOC103042006 NA other upstream 1385714 57802891 ~ 57812488 (+)
G28865 NA other upstream 1795810 57401925 ~ 57402392 (+)
dcaf4 dcaf4,LOC107602090,LOC107659175,LOC107562700 other upstream 2492110 56695844 ~ 56706092 (+)
G29382 NA other downstream 22248 59220532 ~ 59221036 (+)
LOC111194375 NA other downstream 22982 59221266 ~ 59228840 (+)
atraid atraid other downstream 356001 59554285 ~ 59559762 (+)
nme6 nme6 other downstream 388425 59586709 ~ 59598332 (+)
c3h14orf2 NA other downstream 1322058 60520342 ~ 60525051 (+)

Expression


Co-expression Network