trnam-cau_11


Basic Information

Item Value
gene id trnam-cau_11
gene name NA
gene type misc
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035899.1
NCBI id CM008302.1
chromosome length 74127438
location 53631087 ~ 53631159 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>trnam-cau_11
GCCTCGTTAGCGCAGTAGGTAGCGCGTCAGTCTCATAATCTGAAGGTCGTGAGTTCGATCCTCACACGGGGca

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
trnam-cau_11 True 73 tRNA 0.56 1 53631087 53631159

Neighbor

gene id symbol gene type direction distance location
LOC103041583 LOC108417958 coding upstream 801803 52825184 ~ 52829284 (+)
LOC111188773 LOC108417958 coding upstream 814593 52811053 ~ 52816494 (+)
LOC103033541 LOC108413844,LOC108417958 coding upstream 841718 52785659 ~ 52789369 (+)
LOC111188745 NA coding upstream 849223 52769242 ~ 52781864 (+)
LOC103032675 kcnk10a,LOC103032675,LOC108413877,LOC107664828,LOC107582110,LOC107740298,LOC107747370,LOC107668129,LOC105017581 coding upstream 1021266 52574938 ~ 52609821 (+)
epb41l2 epb41l2,LOC107560489,LOC106571359,LOC100380760 coding downstream 332403 53963562 ~ 54049416 (+)
scara5 scara5,LOC104952888 coding downstream 636225 54267384 ~ 54399891 (+)
LOC103031746 NA coding downstream 802564 54433723 ~ 54455524 (+)
LOC103038902 gopc,LOC107743304,LOC107727658,LOC107697149 coding downstream 1034249 54665408 ~ 54689752 (+)
tdrd15 NA coding downstream 1196465 54827624 ~ 54843995 (+)
G27935 NA non-coding upstream 17080 53613777 ~ 53614007 (+)
G27923 NA non-coding upstream 53889 53576776 ~ 53577198 (+)
G27917 NA non-coding upstream 95862 53534600 ~ 53535225 (+)
G27903 NA non-coding upstream 126663 53499475 ~ 53504424 (+)
G27875 NA non-coding upstream 300310 53327872 ~ 53330777 (+)
G27962 NA non-coding downstream 43429 53674588 ~ 53675007 (+)
G27964 NA non-coding downstream 56540 53687699 ~ 53689734 (+)
G27966 med23 non-coding downstream 60567 53691726 ~ 53693741 (+)
G27972 med23 non-coding downstream 64791 53695950 ~ 53696768 (+)
G27984 med23 non-coding downstream 82606 53713765 ~ 53715952 (+)
trnar-acg_6 NA other upstream 96 53630919 ~ 53630991 (+)
trnae-uuc_8 NA other upstream 364 53630652 ~ 53630723 (+)
trnah-gug_6 NA other upstream 723 53630293 ~ 53630364 (+)
trnam-cau_10 NA other upstream 1173 53629842 ~ 53629914 (+)
trnar-acg_5 NA other upstream 1341 53629674 ~ 53629746 (+)
trnah-gug_7 NA other downstream 379 53631538 ~ 53631609 (+)
trnae-uuc_9 NA other downstream 738 53631897 ~ 53631968 (+)
trnar-acg_7 NA other downstream 1005 53632164 ~ 53632236 (+)
trnam-cau_12 NA other downstream 1173 53632332 ~ 53632404 (+)
trnah-gug_8 NA other downstream 1624 53632783 ~ 53632854 (+)

Expression


Co-expression Network