CI01000010_00826648_00831638


Basic Information

Item Value
gene id CI01000010_00826648_00831638
gene name NA
gene type misc
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000010
NCBI id null
chromosome length 12265998
location 826648 ~ 832705 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000010_00826648_00831638.mRNA
CGGCCTCCAGTTTTACTTTCTGTCGCCCTGCGGTGGAATACAGGGCTCTTCCAGAGGACTTTAAGTACCAACTGAGTCGTTGTGCAGGTGGAAACCTTACCTGGCATGAGGGGCATGGACGCAAAACGGCAGGTGGTCGACAGGTCAAACTACTGCAGCAGCCTGGAACCGAAGGACTGCAGTTACGTTCAGGTGACTCGTACTCTGTTTACCACACCAGCCCCACCTTGCCGTGTCTCTCCAGACCAGTGGTTCTGTGGTCTCAGCAGGATGTGTGCAGATGGCTAAAGAAGCACTGTCCTCACAACTACTTGACCTACGTGGAAGCCTTTTCCCACCACGCAATTACAGGTGTGTAGTCCAACTTAAAACAAAAAACAATTGCAGTTATTGTATATAATTTATATCCCTGTATGATGTTAACGTGTAAGCCATTATTCATATGGAATTGCCTATGCATATTCTGTATAAAATCTCACATCACAGTAGCGACCCTGCAAAAAAAAAAAAAAAAAAAGGTATCGCATACTCAGCAGTTAGACCAATCCCCTGAAACCAACACATCTACTGAATCTCATATGGTATGACAGAAGCATTAACTTTTTAGCTGAAGGTCAGCCAACCTGTGCTCTCCTAAAAACATGTATCTTGTCAAAGAACTGATACTATTTTATTCTCAGCCTCTGAATTTACAGTTCCCTGTGCTTTACTCTTTCCTGCTCCATTTTCAATATTCTAAAAAAAAATGTAAATGTTCTAGCACTGGCACAGGAAACTCTTTTTCTTTTTAAAAGACAAAGAAAAAAGTGTCAATTTTAAGGGCTTTTGAAAAGAATCAATTTAATTCCAATTTTAATTTATTTATAAAGCACAATTGAAAACAAATGCCGTTGACCAAAGTGTGGTACAAGAAGTCATAAATAACAGACATAACCATAAAATTCATTCAGGCAGGCACAAAGTCACAGATGTACAAATGGAGCATAAACAGTAAAGCAACACATCACAGATTGTAAGCCAGGTCAAATAGAAACGTTTTTAACGATTTCGATTTAAAAATGGTTAATGTAGGGGCAGTTCTGATTTGATTTGGCAAGCTGTTCCAAAGTTTAGGAGTGGCTACGGCGATTGCCCGATTGCTCATAGACTTTAGAACAGTTTTTTAGAACAACTAAGGGTGCGTTCACACTTGTAGTTCGGTTCGTTTGGTCCGGACCAAAGAAGAAAAAAAAACATTTGGGGCACGGCTGCTAAGGCCCCTCCATGGTGCAGACTCTGTCTAAGTCAGTGGTTCTCTCCCGGGGGGGGGGGCGAGTAGGCTACAGGATGGGAGGAAAAAAAACCTGAAAAAAAAAAATTGCAAATTTTTTTTATCACTAAACTACTGTCATAAAAAGTTATAGTTTTGTATATACATAACTCCTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000010_00826648_00831638.mRNA False 1426 mRNA 0.41 2 826648 832705

Neighbor

gene id symbol gene type direction distance location
CI01000010_00808732_00810151 NA coding upstream 16317 808732 ~ 810331 (+)
CI01000010_00797362_00800297 SYP, SYPA coding upstream 26347 797362 ~ 800301 (+)
CI01000010_00746445_00783522 CACNA1FB, CACNA1F coding upstream 43126 746445 ~ 783522 (+)
CI01000010_00588108_00595271 PDZD4 coding upstream 231186 587629 ~ 595462 (+)
CI01000010_00529313_00531098 NA coding upstream 295420 529313 ~ 531228 (+)
CI01000010_00841791_00854049 UCKL1A, UCKL1B, UCKL1 coding downstream 9086 841791 ~ 854239 (+)
CI01000010_00881905_00883563 NA coding downstream 48490 881195 ~ 883684 (+)
CI01000010_00886120_00889930 NA coding downstream 53186 885891 ~ 889959 (+)
CI01000010_00892258_00898466 YTHDF1 coding downstream 59553 892258 ~ 898554 (+)
CI01000010_00907286_00907804 NA coding downstream 74357 907062 ~ 907881 (+)
G60817 NA non-coding upstream 37222 788888 ~ 789426 (+)
G60801 NA non-coding upstream 90639 727837 ~ 736009 (+)
G60780 NA non-coding upstream 148541 673066 ~ 678107 (+)
G60693 NA non-coding upstream 229553 596824 ~ 597095 (+)
G60745 NA non-coding upstream 258716 567603 ~ 567932 (+)
G60852 NA non-coding downstream 116152 948857 ~ 959047 (+)
G60915 NA non-coding downstream 186312 1019017 ~ 1019485 (+)
G61218 NA non-coding downstream 417540 1250245 ~ 1250446 (+)
G61220 NA non-coding downstream 419631 1252336 ~ 1252899 (+)
G61219 NA non-coding downstream 420363 1253068 ~ 1253739 (+)
CI01000010_00946586_00947327 NA other downstream 112477 945182 ~ 947577 (+)
CI01000010_03197380_03199958 NA other downstream 2361450 3197380 ~ 3200044 (+)
CI01000010_03320340_03346243 NA other downstream 2480990 3313695 ~ 3347796 (+)
G62838 NA other downstream 3057390 3890095 ~ 3893793 (+)

Expression


Co-expression Network