trnam-cau_8


Basic Information

Item Value
gene id trnam-cau_8
gene name NA
gene type misc
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035899.1
NCBI id CM008302.1
chromosome length 74127438
location 53627352 ~ 53627424 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>trnam-cau_8
GCCTCGTTAGCGCAGTAGGTAGCGCGTCAGTCTCATAATCTGAAGGTCGTGAGTTCGATCCTCACACGGGGca

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
trnam-cau_8 True 73 tRNA 0.60 1 53627352 53627424

Neighbor

gene id symbol gene type direction distance location
LOC103041583 LOC108417958 coding upstream 798068 52825184 ~ 52829284 (+)
LOC111188773 LOC108417958 coding upstream 810858 52811053 ~ 52816494 (+)
LOC103033541 LOC108413844,LOC108417958 coding upstream 837983 52785659 ~ 52789369 (+)
LOC111188745 NA coding upstream 845488 52769242 ~ 52781864 (+)
LOC103032675 kcnk10a,LOC103032675,LOC108413877,LOC107664828,LOC107582110,LOC107740298,LOC107747370,LOC107668129,LOC105017581 coding upstream 1017531 52574938 ~ 52609821 (+)
epb41l2 epb41l2,LOC107560489,LOC106571359,LOC100380760 coding downstream 336138 53963562 ~ 54049416 (+)
scara5 scara5,LOC104952888 coding downstream 639960 54267384 ~ 54399891 (+)
LOC103031746 NA coding downstream 806299 54433723 ~ 54455524 (+)
LOC103038902 gopc,LOC107743304,LOC107727658,LOC107697149 coding downstream 1037984 54665408 ~ 54689752 (+)
tdrd15 NA coding downstream 1200200 54827624 ~ 54843995 (+)
G27935 NA non-coding upstream 13345 53613777 ~ 53614007 (+)
G27923 NA non-coding upstream 50154 53576776 ~ 53577198 (+)
G27917 NA non-coding upstream 92127 53534600 ~ 53535225 (+)
G27903 NA non-coding upstream 122928 53499475 ~ 53504424 (+)
G27875 NA non-coding upstream 296575 53327872 ~ 53330777 (+)
G27962 NA non-coding downstream 47164 53674588 ~ 53675007 (+)
G27964 NA non-coding downstream 60275 53687699 ~ 53689734 (+)
G27966 med23 non-coding downstream 64302 53691726 ~ 53693741 (+)
G27972 med23 non-coding downstream 68526 53695950 ~ 53696768 (+)
G27984 med23 non-coding downstream 86341 53713765 ~ 53715952 (+)
trnar-acg_3 NA other upstream 96 53627184 ~ 53627256 (+)
trnae-uuc_5 NA other upstream 364 53626917 ~ 53626988 (+)
trnah-gug_3 NA other upstream 723 53626558 ~ 53626629 (+)
trnam-cau_7 NA other upstream 1173 53626107 ~ 53626179 (+)
trnar-acg_2 NA other upstream 1341 53625939 ~ 53626011 (+)
trnah-gug_4 NA other downstream 379 53627803 ~ 53627874 (+)
trnae-uuc_6 NA other downstream 738 53628162 ~ 53628233 (+)
trnar-acg_4 NA other downstream 1005 53628429 ~ 53628501 (+)
trnam-cau_9 NA other downstream 1173 53628597 ~ 53628669 (+)
trnah-gug_5 NA other downstream 1624 53629048 ~ 53629119 (+)

Expression


Co-expression Network