trnam-cau_9


Basic Information

Item Value
gene id trnam-cau_9
gene name NA
gene type misc
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035899.1
NCBI id CM008302.1
chromosome length 74127438
location 53628597 ~ 53628669 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>trnam-cau_9
GCCTCGTTAGCGCAGTAGGTAGCGCGTCAGTCTCATAATCTGAAGGTCGTGAGTTCGATCCTCACACGGGGca

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
trnam-cau_9 True 73 tRNA 0.60 1 53628597 53628669

Neighbor

gene id symbol gene type direction distance location
LOC103041583 LOC108417958 coding upstream 799313 52825184 ~ 52829284 (+)
LOC111188773 LOC108417958 coding upstream 812103 52811053 ~ 52816494 (+)
LOC103033541 LOC108413844,LOC108417958 coding upstream 839228 52785659 ~ 52789369 (+)
LOC111188745 NA coding upstream 846733 52769242 ~ 52781864 (+)
LOC103032675 kcnk10a,LOC103032675,LOC108413877,LOC107664828,LOC107582110,LOC107740298,LOC107747370,LOC107668129,LOC105017581 coding upstream 1018776 52574938 ~ 52609821 (+)
epb41l2 epb41l2,LOC107560489,LOC106571359,LOC100380760 coding downstream 334893 53963562 ~ 54049416 (+)
scara5 scara5,LOC104952888 coding downstream 638715 54267384 ~ 54399891 (+)
LOC103031746 NA coding downstream 805054 54433723 ~ 54455524 (+)
LOC103038902 gopc,LOC107743304,LOC107727658,LOC107697149 coding downstream 1036739 54665408 ~ 54689752 (+)
tdrd15 NA coding downstream 1198955 54827624 ~ 54843995 (+)
G27935 NA non-coding upstream 14590 53613777 ~ 53614007 (+)
G27923 NA non-coding upstream 51399 53576776 ~ 53577198 (+)
G27917 NA non-coding upstream 93372 53534600 ~ 53535225 (+)
G27903 NA non-coding upstream 124173 53499475 ~ 53504424 (+)
G27875 NA non-coding upstream 297820 53327872 ~ 53330777 (+)
G27962 NA non-coding downstream 45919 53674588 ~ 53675007 (+)
G27964 NA non-coding downstream 59030 53687699 ~ 53689734 (+)
G27966 med23 non-coding downstream 63057 53691726 ~ 53693741 (+)
G27972 med23 non-coding downstream 67281 53695950 ~ 53696768 (+)
G27984 med23 non-coding downstream 85096 53713765 ~ 53715952 (+)
trnar-acg_4 NA other upstream 96 53628429 ~ 53628501 (+)
trnae-uuc_6 NA other upstream 364 53628162 ~ 53628233 (+)
trnah-gug_4 NA other upstream 723 53627803 ~ 53627874 (+)
trnam-cau_8 NA other upstream 1173 53627352 ~ 53627424 (+)
trnar-acg_3 NA other upstream 1341 53627184 ~ 53627256 (+)
trnah-gug_5 NA other downstream 379 53629048 ~ 53629119 (+)
trnae-uuc_7 NA other downstream 738 53629407 ~ 53629478 (+)
trnar-acg_5 NA other downstream 1005 53629674 ~ 53629746 (+)
trnam-cau_10 NA other downstream 1173 53629842 ~ 53629914 (+)
trnah-gug_6 NA other downstream 1624 53630293 ~ 53630364 (+)

Expression


Co-expression Network