trnas-aga_4


Basic Information

Item Value
gene id trnas-aga_4
gene name NA
gene type misc
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035899.1
NCBI id CM008302.1
chromosome length 74127438
location 53644079 ~ 53644160 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>trnas-aga_4
GTAGtcgtggccgagtggttaaggcgatggacTAGAAATCCATTGGGGTCTCCCcgcgcaggttcgaatcctgccGACTACG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
trnas-aga_4 True 82 tRNA 0.59 1 53644079 53644160

Neighbor

gene id symbol gene type direction distance location
LOC103041583 LOC108417958 coding upstream 814795 52825184 ~ 52829284 (+)
LOC111188773 LOC108417958 coding upstream 827585 52811053 ~ 52816494 (+)
LOC103033541 LOC108413844,LOC108417958 coding upstream 854710 52785659 ~ 52789369 (+)
LOC111188745 NA coding upstream 862215 52769242 ~ 52781864 (+)
LOC103032675 kcnk10a,LOC103032675,LOC108413877,LOC107664828,LOC107582110,LOC107740298,LOC107747370,LOC107668129,LOC105017581 coding upstream 1034258 52574938 ~ 52609821 (+)
epb41l2 epb41l2,LOC107560489,LOC106571359,LOC100380760 coding downstream 319402 53963562 ~ 54049416 (+)
scara5 scara5,LOC104952888 coding downstream 623224 54267384 ~ 54399891 (+)
LOC103031746 NA coding downstream 789563 54433723 ~ 54455524 (+)
LOC103038902 gopc,LOC107743304,LOC107727658,LOC107697149 coding downstream 1021248 54665408 ~ 54689752 (+)
tdrd15 NA coding downstream 1183464 54827624 ~ 54843995 (+)
G27935 NA non-coding upstream 30072 53613777 ~ 53614007 (+)
G27923 NA non-coding upstream 66881 53576776 ~ 53577198 (+)
G27917 NA non-coding upstream 108854 53534600 ~ 53535225 (+)
G27903 NA non-coding upstream 139655 53499475 ~ 53504424 (+)
G27875 NA non-coding upstream 313302 53327872 ~ 53330777 (+)
G27962 NA non-coding downstream 30428 53674588 ~ 53675007 (+)
G27964 NA non-coding downstream 43539 53687699 ~ 53689734 (+)
G27966 med23 non-coding downstream 47566 53691726 ~ 53693741 (+)
G27972 med23 non-coding downstream 51790 53695950 ~ 53696768 (+)
G27984 med23 non-coding downstream 69605 53713765 ~ 53715952 (+)
trnas-uga_3 NA other upstream 197 53643801 ~ 53643882 (+)
trnas-aga_3 NA other upstream 989 53643009 ~ 53643090 (+)
trnas-aga_2 NA other upstream 1267 53642731 ~ 53642812 (+)
trnas-uga_2 NA other upstream 1545 53642453 ~ 53642534 (+)
trnas-uga_1 NA other upstream 2337 53641661 ~ 53641742 (+)
trnas-uga_4 NA other downstream 255 53644415 ~ 53644496 (+)
trnas-aga_5 NA other downstream 1047 53645207 ~ 53645288 (+)
trnas-uga_5 NA other downstream 1839 53645999 ~ 53646080 (+)
trnas-uga_6 NA other downstream 2631 53646791 ~ 53646872 (+)
trnas-cga NA other downstream 3096 53647256 ~ 53647337 (+)

Expression


Co-expression Network