trnas-aga_7


Basic Information

Item Value
gene id trnas-aga_7
gene name NA
gene type misc
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035899.1
NCBI id CM008302.1
chromosome length 74127438
location 53652857 ~ 53652938 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>trnas-aga_7
GTAGtcgtggccgagtggttaaggcgatggacTAGAAATCCATTGGGGTCTCCCcgcgcaggttcgaatcctgccGACTACG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
trnas-aga_7 True 82 tRNA 0.59 1 53652857 53652938

Neighbor

gene id symbol gene type direction distance location
LOC103041583 LOC108417958 coding upstream 823573 52825184 ~ 52829284 (+)
LOC111188773 LOC108417958 coding upstream 836363 52811053 ~ 52816494 (+)
LOC103033541 LOC108413844,LOC108417958 coding upstream 863488 52785659 ~ 52789369 (+)
LOC111188745 NA coding upstream 870993 52769242 ~ 52781864 (+)
LOC103032675 kcnk10a,LOC103032675,LOC108413877,LOC107664828,LOC107582110,LOC107740298,LOC107747370,LOC107668129,LOC105017581 coding upstream 1043036 52574938 ~ 52609821 (+)
epb41l2 epb41l2,LOC107560489,LOC106571359,LOC100380760 coding downstream 310624 53963562 ~ 54049416 (+)
scara5 scara5,LOC104952888 coding downstream 614446 54267384 ~ 54399891 (+)
LOC103031746 NA coding downstream 780785 54433723 ~ 54455524 (+)
LOC103038902 gopc,LOC107743304,LOC107727658,LOC107697149 coding downstream 1012470 54665408 ~ 54689752 (+)
tdrd15 NA coding downstream 1174686 54827624 ~ 54843995 (+)
G27935 NA non-coding upstream 38850 53613777 ~ 53614007 (+)
G27923 NA non-coding upstream 75659 53576776 ~ 53577198 (+)
G27917 NA non-coding upstream 117632 53534600 ~ 53535225 (+)
G27903 NA non-coding upstream 148433 53499475 ~ 53504424 (+)
G27875 NA non-coding upstream 322080 53327872 ~ 53330777 (+)
G27962 NA non-coding downstream 21650 53674588 ~ 53675007 (+)
G27964 NA non-coding downstream 34761 53687699 ~ 53689734 (+)
G27966 med23 non-coding downstream 38788 53691726 ~ 53693741 (+)
G27972 med23 non-coding downstream 43012 53695950 ~ 53696768 (+)
G27984 med23 non-coding downstream 60827 53713765 ~ 53715952 (+)
trnas-uga_10 NA other upstream 268 53652508 ~ 53652589 (+)
trnal-cag_6 NA other upstream 640 53652135 ~ 53652217 (+)
trnas-uga_9 NA other upstream 829 53651947 ~ 53652028 (+)
trnas-aga_6 NA other upstream 1710 53651066 ~ 53651147 (+)
trnas-uga_8 NA other upstream 1896 53650880 ~ 53650961 (+)
trnas-aga_8 NA other downstream 711 53653649 ~ 53653730 (+)
G28072 NA other downstream 725303 54378241 ~ 54379306 (+)
LOC103023616 LOC108424481,LOC108257757 other downstream 1727666 55380604 ~ 55403330 (+)
LOC103029514 srsf5,srsf5b,LOC103029514,LOC107756601,LOC107602033,LOC107549086,LOC107721313 other downstream 2579801 56232739 ~ 56239729 (+)
LOC103033217 rab15,LOC107668202,LOC107671782,LOC103457353,LOC106608154,LOC106571087,LOC104949855 other downstream 2637809 56290747 ~ 56312111 (+)

Expression


Co-expression Network