trnas-cga_2


Basic Information

Item Value
gene id trnas-cga_2
gene name NA
gene type misc
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035899.1
NCBI id CM008302.1
chromosome length 74127438
location 53647953 ~ 53648034 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>trnas-cga_2
GTAGTtgtggccgagtggttaaggcgatggGCTCGAAATCCATTGGGGTCTCCCcgcgcaggttcgaatcctgccGACTACG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
trnas-cga_2 True 82 tRNA 0.54 1 53647953 53648034

Neighbor

gene id symbol gene type direction distance location
LOC103041583 LOC108417958 coding upstream 818669 52825184 ~ 52829284 (+)
LOC111188773 LOC108417958 coding upstream 831459 52811053 ~ 52816494 (+)
LOC103033541 LOC108413844,LOC108417958 coding upstream 858584 52785659 ~ 52789369 (+)
LOC111188745 NA coding upstream 866089 52769242 ~ 52781864 (+)
LOC103032675 kcnk10a,LOC103032675,LOC108413877,LOC107664828,LOC107582110,LOC107740298,LOC107747370,LOC107668129,LOC105017581 coding upstream 1038132 52574938 ~ 52609821 (+)
epb41l2 epb41l2,LOC107560489,LOC106571359,LOC100380760 coding downstream 315528 53963562 ~ 54049416 (+)
scara5 scara5,LOC104952888 coding downstream 619350 54267384 ~ 54399891 (+)
LOC103031746 NA coding downstream 785689 54433723 ~ 54455524 (+)
LOC103038902 gopc,LOC107743304,LOC107727658,LOC107697149 coding downstream 1017374 54665408 ~ 54689752 (+)
tdrd15 NA coding downstream 1179590 54827624 ~ 54843995 (+)
G27935 NA non-coding upstream 33946 53613777 ~ 53614007 (+)
G27923 NA non-coding upstream 70755 53576776 ~ 53577198 (+)
G27917 NA non-coding upstream 112728 53534600 ~ 53535225 (+)
G27903 NA non-coding upstream 143529 53499475 ~ 53504424 (+)
G27875 NA non-coding upstream 317176 53327872 ~ 53330777 (+)
G27962 NA non-coding downstream 26554 53674588 ~ 53675007 (+)
G27964 NA non-coding downstream 39665 53687699 ~ 53689734 (+)
G27966 med23 non-coding downstream 43692 53691726 ~ 53693741 (+)
G27972 med23 non-coding downstream 47916 53695950 ~ 53696768 (+)
G27984 med23 non-coding downstream 65731 53713765 ~ 53715952 (+)
trnas-cga_1 NA other upstream 266 53647606 ~ 53647687 (+)
trnas-cga NA other upstream 616 53647256 ~ 53647337 (+)
trnas-uga_6 NA other upstream 1081 53646791 ~ 53646872 (+)
trnas-uga_5 NA other upstream 1873 53645999 ~ 53646080 (+)
trnas-aga_5 NA other upstream 2665 53645207 ~ 53645288 (+)
trnas-cga_3 NA other downstream 268 53648302 ~ 53648383 (+)
trnas-uga_7 NA other downstream 454 53648488 ~ 53648569 (+)
trnal-cag_1 NA other downstream 644 53648678 ~ 53648760 (+)
trnal-cag_2 NA other downstream 1020 53649054 ~ 53649136 (+)
trnas-cga_4 NA other downstream 1555 53649589 ~ 53649670 (+)

Expression


Co-expression Network