trnas-cga_3


Basic Information

Item Value
gene id trnas-cga_3
gene name NA
gene type misc
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035899.1
NCBI id CM008302.1
chromosome length 74127438
location 53648302 ~ 53648383 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>trnas-cga_3
GTAGTtgtggccgagtggttaaggcgatggGCTCGAAATCCATTGGGGTCTCCCcgcgcaggttcgaatcctttTAACTGTG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
trnas-cga_3 True 82 tRNA 0.60 1 53648302 53648383

Neighbor

gene id symbol gene type direction distance location
LOC103041583 LOC108417958 coding upstream 819018 52825184 ~ 52829284 (+)
LOC111188773 LOC108417958 coding upstream 831808 52811053 ~ 52816494 (+)
LOC103033541 LOC108413844,LOC108417958 coding upstream 858933 52785659 ~ 52789369 (+)
LOC111188745 NA coding upstream 866438 52769242 ~ 52781864 (+)
LOC103032675 kcnk10a,LOC103032675,LOC108413877,LOC107664828,LOC107582110,LOC107740298,LOC107747370,LOC107668129,LOC105017581 coding upstream 1038481 52574938 ~ 52609821 (+)
epb41l2 epb41l2,LOC107560489,LOC106571359,LOC100380760 coding downstream 315179 53963562 ~ 54049416 (+)
scara5 scara5,LOC104952888 coding downstream 619001 54267384 ~ 54399891 (+)
LOC103031746 NA coding downstream 785340 54433723 ~ 54455524 (+)
LOC103038902 gopc,LOC107743304,LOC107727658,LOC107697149 coding downstream 1017025 54665408 ~ 54689752 (+)
tdrd15 NA coding downstream 1179241 54827624 ~ 54843995 (+)
G27935 NA non-coding upstream 34295 53613777 ~ 53614007 (+)
G27923 NA non-coding upstream 71104 53576776 ~ 53577198 (+)
G27917 NA non-coding upstream 113077 53534600 ~ 53535225 (+)
G27903 NA non-coding upstream 143878 53499475 ~ 53504424 (+)
G27875 NA non-coding upstream 317525 53327872 ~ 53330777 (+)
G27962 NA non-coding downstream 26205 53674588 ~ 53675007 (+)
G27964 NA non-coding downstream 39316 53687699 ~ 53689734 (+)
G27966 med23 non-coding downstream 43343 53691726 ~ 53693741 (+)
G27972 med23 non-coding downstream 47567 53695950 ~ 53696768 (+)
G27984 med23 non-coding downstream 65382 53713765 ~ 53715952 (+)
trnas-cga_2 NA other upstream 268 53647953 ~ 53648034 (+)
trnas-cga_1 NA other upstream 615 53647606 ~ 53647687 (+)
trnas-cga NA other upstream 965 53647256 ~ 53647337 (+)
trnas-uga_6 NA other upstream 1430 53646791 ~ 53646872 (+)
trnas-uga_5 NA other upstream 2222 53645999 ~ 53646080 (+)
trnas-uga_7 NA other downstream 105 53648488 ~ 53648569 (+)
trnal-cag_1 NA other downstream 295 53648678 ~ 53648760 (+)
trnal-cag_2 NA other downstream 671 53649054 ~ 53649136 (+)
trnas-cga_4 NA other downstream 1206 53649589 ~ 53649670 (+)
trnas-cga_5 NA other downstream 1391 53649774 ~ 53649855 (+)

Expression


Co-expression Network