trnas-uga


Basic Information

Item Value
gene id trnas-uga
gene name NA
gene type misc
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035899.1
NCBI id CM008302.1
chromosome length 74127438
location 53640591 ~ 53640672 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>trnas-uga
GTAGtcgtggccgagtggttaaggcgatggacTTGAAATCCATTGGGGTTTCCCCGCGCAGGTTCGAACCCTGCCGACTACG

Function

NR:

description
PREDICTED: potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
trnas-uga True 82 tRNA 0.59 1 53640591 53640672

Neighbor

gene id symbol gene type direction distance location
LOC103041583 LOC108417958 coding upstream 811307 52825184 ~ 52829284 (+)
LOC111188773 LOC108417958 coding upstream 824097 52811053 ~ 52816494 (+)
LOC103033541 LOC108413844,LOC108417958 coding upstream 851222 52785659 ~ 52789369 (+)
LOC111188745 NA coding upstream 858727 52769242 ~ 52781864 (+)
LOC103032675 kcnk10a,LOC103032675,LOC108413877,LOC107664828,LOC107582110,LOC107740298,LOC107747370,LOC107668129,LOC105017581 coding upstream 1030770 52574938 ~ 52609821 (+)
epb41l2 epb41l2,LOC107560489,LOC106571359,LOC100380760 coding downstream 322890 53963562 ~ 54049416 (+)
scara5 scara5,LOC104952888 coding downstream 626712 54267384 ~ 54399891 (+)
LOC103031746 NA coding downstream 793051 54433723 ~ 54455524 (+)
LOC103038902 gopc,LOC107743304,LOC107727658,LOC107697149 coding downstream 1024736 54665408 ~ 54689752 (+)
tdrd15 NA coding downstream 1186952 54827624 ~ 54843995 (+)
G27935 NA non-coding upstream 26584 53613777 ~ 53614007 (+)
G27923 NA non-coding upstream 63393 53576776 ~ 53577198 (+)
G27917 NA non-coding upstream 105366 53534600 ~ 53535225 (+)
G27903 NA non-coding upstream 136167 53499475 ~ 53504424 (+)
G27875 NA non-coding upstream 309814 53327872 ~ 53330777 (+)
G27962 NA non-coding downstream 33916 53674588 ~ 53675007 (+)
G27964 NA non-coding downstream 47027 53687699 ~ 53689734 (+)
G27966 med23 non-coding downstream 51054 53691726 ~ 53693741 (+)
G27972 med23 non-coding downstream 55278 53695950 ~ 53696768 (+)
G27984 med23 non-coding downstream 73093 53713765 ~ 53715952 (+)
trnas-aga NA other upstream 711 53639799 ~ 53639880 (+)
trnae-uuc_15 NA other upstream 1152 53639368 ~ 53639439 (+)
trnah-gug_13 NA other upstream 1511 53639009 ~ 53639080 (+)
trnam-cau_17 NA other upstream 1961 53638558 ~ 53638630 (+)
trnar-acg_12 NA other upstream 2129 53638390 ~ 53638462 (+)
trnas-aga_1 NA other downstream 197 53640869 ~ 53640950 (+)
trnas-uga_1 NA other downstream 989 53641661 ~ 53641742 (+)
trnas-uga_2 NA other downstream 1781 53642453 ~ 53642534 (+)
trnas-aga_2 NA other downstream 2059 53642731 ~ 53642812 (+)
trnas-aga_3 NA other downstream 2337 53643009 ~ 53643090 (+)

Expression


Co-expression Network