CI01000010_00886120_00889930


Basic Information

Item Value
gene id CI01000010_00886120_00889930
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000010
NCBI id null
chromosome length 12265998
location 885891 ~ 889959 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000010_00886120_00889930.mRNA
ATATTTAAGGACCCACCCCATTTTATTTACCCCGATCTCACCCTCTGTCCCCCCGCCTACTGCTTCATACTCCGTTTTTAACCCTATGCGCTATGTACAGCTATGATCACAGCCCATTGTAAGGGAAGCATACTGAAATATACCTCGAGTAAATACTGAGGATCTTCAAAAATGCATCTGTTTTATTTACCATTTTGAGTTCACGTTTATATCGGAGAGAATAGTGAAGATGGGGTGCTGCTCGGGGAGGTGCATGTTGATGTTCTTCTGCGCTCTTCAACTGATCACTGTTGTGGAGAGACAGGTGTTTGATTTTCTAGGTTACCAGTGGGCACCCATCCTTGTCAACTTCCTGCACGTCATTGTGGTGATATTGGGCTTGTTTGGGACAGTCCAGTACAAGCCCCGTTATGTAGTTTTGTATATAGTCTGGACCGTGTTTTGGGTGACTTGGAATATCTTTATCTGTTGCCTTTATCTAGACCTCGGAGGGCTTTCAAAGGACAGTGATTATCTGTCACTGGGACTTTCATCTCACCGTTCATGGTGGAAGGACAATGGTCCAGGCTGTGAGAACAGAAACCTCCCGACCACTAGATGGCAGCATTTGGACAGTCCTGCTCTGGTCTCCGAACTGAGCTGCTTGTTAGAGTATCAGTACATCGAGGTTATGCACAGCGCCCTGCAACTGTTCATTTCTGCCCTGGGATTTGTATTTGCCTGCTACATCGTCAGCATCTTCAATGAAGAGGAAGACACATGTTTGTAAAATCCATTATTTTACCCTTTAAAAGTATA

Function

GO:

id name namespace
GO:0016021 integral component of membrane cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000010_00886120_00889930.mRNA True 798 mRNA 0.45 5 885891 889959

Neighbor

gene id symbol gene type direction distance location
CI01000010_00881905_00883563 NA coding upstream 2207 881195 ~ 883684 (+)
CI01000010_00841791_00854049 UCKL1A, UCKL1B, UCKL1 coding upstream 31652 841791 ~ 854239 (+)
CI01000010_00826648_00831638 NA coding upstream 53186 826648 ~ 832705 (+)
CI01000010_00808732_00810151 NA coding upstream 75560 808732 ~ 810331 (+)
CI01000010_00797362_00800297 SYP, SYPA coding upstream 85590 797362 ~ 800301 (+)
CI01000010_00892258_00898466 YTHDF1 coding downstream 2299 892258 ~ 898554 (+)
CI01000010_00907286_00907804 NA coding downstream 17103 907062 ~ 907881 (+)
CI01000010_00910595_00911893 MGC83062, GID8, GID8.L, CT011, GID8A, GID8B coding downstream 20636 910595 ~ 911946 (+)
CI01000010_00912846_00919998 NA coding downstream 22887 912846 ~ 920227 (+)
CI01000010_00924389_00928340 DNAJC5 coding downstream 34002 923961 ~ 928351 (+)
G60817 NA non-coding upstream 96465 788888 ~ 789426 (+)
G60801 NA non-coding upstream 149882 727837 ~ 736009 (+)
G60780 NA non-coding upstream 207784 673066 ~ 678107 (+)
G60693 NA non-coding upstream 288796 596824 ~ 597095 (+)
G60745 NA non-coding upstream 317959 567603 ~ 567932 (+)
G60852 NA non-coding downstream 58898 948857 ~ 959047 (+)
G60915 NA non-coding downstream 129058 1019017 ~ 1019485 (+)
G61218 NA non-coding downstream 360286 1250245 ~ 1250446 (+)
G61220 NA non-coding downstream 362377 1252336 ~ 1252899 (+)
G61219 NA non-coding downstream 363109 1253068 ~ 1253739 (+)
CI01000010_00946586_00947327 NA other downstream 55223 945182 ~ 947577 (+)
CI01000010_03197380_03199958 NA other downstream 2304196 3197380 ~ 3200044 (+)
CI01000010_03320340_03346243 NA other downstream 2423736 3313695 ~ 3347796 (+)
G62838 NA other downstream 3000136 3890095 ~ 3893793 (+)
G62856 NA other downstream 3047798 3937757 ~ 3939945 (+)

Expression


Co-expression Network