trnat-ugu_5


Basic Information

Item Value
gene id trnat-ugu_5
gene name NA
gene type coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035899.1
NCBI id CM008302.1
chromosome length 74127438
location 6659401 ~ 6659473 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>trnat-ugu_5
ggctccatagctcagtggttagagcactggtctTGTAAACCAGGGGTCGTGAGTTCAATTCTCGCTGGGGCCT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
trnat-ugu_5 True 73 tRNA 0.56 1 6659401 6659473

Neighbor

gene id symbol gene type direction distance location
trnat-ugu_4 NA coding upstream 2773 6656556 ~ 6656628 (+)
trnat-ugu_3 NA coding upstream 4456 6654873 ~ 6654945 (+)
trnat-ugu_2 NA coding upstream 5745 6653584 ~ 6653656 (+)
trnat-ugu_1 NA coding upstream 7349 6651980 ~ 6652052 (+)
trnat-ugu NA coding upstream 8624 6650705 ~ 6650777 (+)
trnat-ugu_6 NA coding downstream 8348 6667821 ~ 6667893 (+)
ino80c ino80c coding downstream 258585 6918058 ~ 6922362 (+)
pdp1 pdp1,LOC107706250,LOC107687812,LOC107595893,LOC107593682 coding downstream 332430 6991903 ~ 7001192 (+)
LOC103046513 rnf41l,LOC108443277,LOC107593678,LOC107723454,LOC107687809 coding downstream 442108 7101581 ~ 7111945 (+)
esrp1 esrp1,LOC107593677,LOC107706288,LOC107657715 coding downstream 482895 7142368 ~ 7172757 (+)
G16811 NA non-coding upstream 13404 6643184 ~ 6645997 (+)
G16815 NA non-coding upstream 16324 6605267 ~ 6643077 (+)
G16831 NA non-coding upstream 82096 6576991 ~ 6577305 (+)
G16829 NA non-coding upstream 84176 6574946 ~ 6575225 (+)
G16828 NA non-coding upstream 84625 6574537 ~ 6574776 (+)
G16838 galnt1,LOC107723435,LOC107657719 non-coding downstream 15242 6674715 ~ 6684107 (+)
G16839 galnt1,LOC107593713,LOC107657719 non-coding downstream 30247 6689720 ~ 6800136 (+)
G16845 NA non-coding downstream 241749 6901222 ~ 6901911 (+)
G16968 NA non-coding downstream 267298 6926771 ~ 6927019 (+)
G16969 NA non-coding downstream 288597 6948070 ~ 7049298 (+)
G16820 NA other upstream 126533 6532396 ~ 6532868 (+)
LOC103025913 NA other upstream 481517 6168760 ~ 6177884 (+)
LOC103038305 NA other upstream 2142092 4515997 ~ 4517309 (+)
nrgn NA other upstream 4488194 2150630 ~ 2171207 (+)
G15839 NA other upstream 4977379 1681159 ~ 1682022 (+)
LOC103032995 NA other downstream 763098 7422571 ~ 7429391 (+)
LOC103041197 NA other downstream 1509366 8168839 ~ 8184837 (+)
G17414 NA other downstream 2016146 8675619 ~ 8716787 (+)
LOC111191971 NA other downstream 2231771 8891244 ~ 8899645 (+)
LOC111191978 NA other downstream 2240467 8899940 ~ 8904004 (+)

Expression


Co-expression Network