CI01000010_00946586_00947327


Basic Information

Item Value
gene id CI01000010_00946586_00947327
gene name NA
gene type misc
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000010
NCBI id null
chromosome length 12265998
location 945182 ~ 947577 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000010_00946586_00947327.mRNA
CTACAAATGGGCCCCGTCGCCTAGCGTTTACCCGACCAAGCCTTGCTTTTGGTGCATTACCAACATCAGCACTCACCAAAAATAAAAGGTAAGGGAATGAAAAAAAAAGTTCATTATATATATAATTGGGACAGGCGGGAAAGACAGGCAAAGTACTATTTACTTTTTATTTACAACTAAACTATTCGTATCAGTAATTCTGAGGTGATGCAAATGAACAAACTGCGTAAGAGAATTTTAGCTCATCTTGTTAGAACTGATAAACCCTATATCTTTGCTTTCTGTAACGTAGCCTGTCTTAGTATTTTGTACTTCCTCTTAATTAACGGTTTCTTTTATTCTTAGTAATTTAGTAGGCTACATGTCAGCTTTTCAAAGCCCTGGTGTGGCTTAAATGTCTCATCTGTTATATGTAGCACAGAAGGGTATTAACCAGGTCACGTGGTAAATCCCTCTTCCCATCTGTAACCTGACATTGACGTCTGCAGGTCCTTGATGTGAAACTAAAGCAACACAAACACGAAATTATTGTGCAATTACTCAATCACTGTGCCTTATTATTATTACTGTATATGAGTAGTTTTTTTATTATTACTGTATATTGGTAATCTTAAAACATTGGTAAACTCTAAATCAGGACATGCACTTATTTTGTATGCATGACTTTAGTATAATCTGTAGCCTGGAAATGTCATGAAGTCCATATATTTTTATTTTTTGATTAGTCTCCCTTTCTTTTAAATGCTCAAAGCAACTGCTAGCAGTCAGCCTCTAACAGCCGGGTACTTTAATAGCAAAGTCTCCTGAAATACGAGCTATTCTGCATCATGGTTGTTCTAAGCAAGTGGGTCTCAGAATATGGAAATTTGATTCTTGAAGTAACAGCTGTTAAGTATCATCTAGTCACACTAATGATAGATAACATGAAGCCGGGATGGATGTGTAGTTTCAGTGGAACATTCTCTTCTTTCAAATGTTAAAACTATTTTGACAATCTACTCTAAATGCACTGATTAATACTTGCATCTTACCAATACCATTGACCATCTGGAAGAAAAATGTTGGCAACACCTTGTCTGTGGTCTTGACAGGGTTAAAACCTCTTTAAATCTTTGAGTGTGCTGAGTTCCAGCACAGATTGCTTGTGCATCTGCCTACCTGAGATTTTTTCCAAGCTGCCCTTGTGTTTCAAAGGCCACAGTGTTGTGGTGCCATGCAGCTGTCGTCCTCAGACACATTAGTTCTCATCATTGCTGTAAATCTTTTTTCAAACAGGTTTTCCATCTTTCCATCTTGCCACTTGACACTTAGAGGACGGGGAAAATGGCAGCAATTCCATCAAGCGGTTCCCTTATCGCCACCCATGATTACTACCGAAGTCTGGCACGACAGGACTCTGGCCACTGGTGGTCCAGTTTCTTCTTTGGGAAGCAGAATCAAATGGGGACACCCAATGGATCTGAATCCCAGCAGAAGGCTGGCACCTACACAGTGACAAATGGTCAAATAACCTGTGTTGCCCGGGAGATTGTGATGAAGAGACAAATGAGTGAGAGCAGTGACTCCGGGAAGGAGCCTGGATCCCCCCTCCCCTCATAAACCACCCCAACCCAATTCCACACCCTTCACCCAGGAGTCACCGCAGGCAGAAGCAGGCGACGGAGGCTCCATTTTTTATTTTTAGTAAAAACTGGCTGCTTTTTATGTCATGCTATATAGTGCTCTTTTTTTTTTTATCTATGACCAAAGTTGTAAAACTAAATGGCAAAAAAATGCTTTCCATTTGACTTGAGTATTTTCGTCACTGTATCACTGGGTGCACTTTGCAATTATATTGTATTTGCTATAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000010_00946586_00947327.mRNA False 1849 mRNA 0.40 3 945263 947577

Neighbor

gene id symbol gene type direction distance location
CI01000010_00944226_00945123 NA coding upstream 85 944226 ~ 945178 (+)
CI01000010_00934527_00937510 NA coding upstream 7287 934527 ~ 937976 (+)
CI01000010_00924389_00928340 DNAJC5 coding upstream 16912 923961 ~ 928351 (+)
CI01000010_00912846_00919998 NA coding upstream 25036 912846 ~ 920227 (+)
CI01000010_00910595_00911893 MGC83062, GID8, GID8.L, CT011, GID8A, GID8B coding upstream 33317 910595 ~ 911946 (+)
CI01000010_01029244_01041878 DNMT3BA coding downstream 81272 1028849 ~ 1042357 (+)
CI01000010_01046137_01048306 MAPRE1A coding downstream 98380 1045957 ~ 1048518 (+)
CI01000010_01050815_01053323 NA coding downstream 103071 1050648 ~ 1053506 (+)
CI01000010_01055064_01058564 SUV39H1A coding downstream 107487 1055064 ~ 1058788 (+)
CI01000010_01062352_01063144 NA coding downstream 114775 1062352 ~ 1063259 (+)
G60817 NA non-coding upstream 155837 788888 ~ 789426 (+)
G60801 NA non-coding upstream 209254 727837 ~ 736009 (+)
G60780 NA non-coding upstream 267156 673066 ~ 678107 (+)
G60693 NA non-coding upstream 348168 596824 ~ 597095 (+)
G60745 NA non-coding upstream 377331 567603 ~ 567932 (+)
G60852 NA non-coding downstream 1280 948857 ~ 959047 (+)
G60915 NA non-coding downstream 71440 1019017 ~ 1019485 (+)
G61218 NA non-coding downstream 302668 1250245 ~ 1250446 (+)
G61220 NA non-coding downstream 304759 1252336 ~ 1252899 (+)
G61219 NA non-coding downstream 305491 1253068 ~ 1253739 (+)
CI01000010_00881905_00883563 NA other upstream 61749 881195 ~ 883684 (+)
CI01000010_00826648_00831638 NA other upstream 106831 826648 ~ 832705 (+)
CI01000010_03197380_03199958 NA other downstream 2246578 3197380 ~ 3200044 (+)
CI01000010_03320340_03346243 NA other downstream 2366118 3313695 ~ 3347796 (+)
G62838 NA other downstream 2942518 3890095 ~ 3893793 (+)
G62856 NA other downstream 2990180 3937757 ~ 3939945 (+)
G62983 NA other downstream 3500595 4448172 ~ 4449327 (+)

Expression


Co-expression Network