G60903


Basic Information

Item Value
gene id G60903
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035903.1
NCBI id CM008306.1
chromosome length 40813162
location 277010 ~ 277322 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU82123
gccgagtggtccagctgtctaaggcgctgccactatgagcaggaggtcgcaggttcgaaccccagctcatgcagctttgccatcaagctgccggcgtcagagggagcaaaattggccctgctccctctgggtgggtagatggcgctctctccccacatcactcctagggtctgtgagctgatgtaccggagccgagccgctgtgctttcctccgagcgcgctggctgctcggcaatgcctgcatcagcagcagctcgaaaagaagcggctggctggcttcacatgtatcgga

Function

GO:

id name namespace
GO:0048731 system development biological_process
GO:0021532 neural tube patterning biological_process
GO:0021903 rostrocaudal neural tube patterning biological_process
GO:0021915 neural tube development biological_process
GO:0007389 pattern specification process biological_process
GO:0030917 midbrain-hindbrain boundary development biological_process
GO:0009790 embryo development biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU82123 True 292 lncRNA 0.61 2 277010 277322

Neighbor

gene id symbol gene type direction distance location
LOC103031583 NA coding upstream 82166 192192 ~ 194844 (+)
braf braf,LOC107725591 coding upstream 98000 148669 ~ 179010 (+)
LOC111192919 NA coding downstream 281704 559026 ~ 565310 (+)
LOC103022716 NA coding downstream 292899 570221 ~ 574501 (+)
LOC107197032 NA coding downstream 309371 586693 ~ 590105 (+)
LOC103021355 LOC103021355,LOC108426405,LOC108279735,LOC107757248,LOC107694301,LOC100694258,LOC107590616 coding downstream 336791 614113 ~ 621742 (+)
syt10 syt10,LOC107744086,LOC107656242,LOC107565666,LOC107592193,LOC107658793 coding downstream 472559 749881 ~ 780797 (+)
G60910 NA non-coding downstream 178514 455836 ~ 470689 (+)
G60983 NA non-coding downstream 339452 616774 ~ 623435 (+)
G60996 NA non-coding downstream 463369 740691 ~ 740898 (+)
G61011 NA non-coding downstream 523327 800649 ~ 800870 (+)
G61016 NA non-coding downstream 556665 833987 ~ 835273 (+)
mrps33 mrps33,LOC106591474,LOC107694294,LOC107725593 other upstream 130236 144189 ~ 146774 (+)
LOC103023024 cry1,LOC103023024,LOC108426403,LOC108279922,LOC105900698,LOC107560722 other downstream 262196 539518 ~ 558580 (+)
LOC103045537 NA other downstream 322337 599659 ~ 625009 (+)
G61014 NA other downstream 529243 806565 ~ 1049056 (+)
G61013 LOC108444125,LOC108444119,LOC108412201,LOC108262118 other downstream 576204 853526 ~ 1043316 (+)
LOC103024246 tspan11,LOC108279944,LOC107593980,LOC106576552,LOC107720401,LOC107560736,LOC107694254 other downstream 1168313 1445635 ~ 1481418 (+)

Expression


Co-expression Network