G61016


Basic Information

Item Value
gene id G61016
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035903.1
NCBI id CM008306.1
chromosome length 40813162
location 833987 ~ 835273 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU82328
ATACTGCACTTCCCATGATTTAGATGCTGGAGTCACCTGTTCAGgagaaaaacccAGACTTGCTGATGGTCCTCATTTGTGCTCTGGGAGACTTGAGGTGATGCTTAACAATAACTGGATCACAGTGTGCAATGCTGaccagcaggatgcagaggttgtgtgtcgagagctgagctgtggttctcctgtggaggttctgggagcagctgcttttggtagaggggagggtcaggtgtggtcagAGGAGCTTCAGTGTAGAGGCAACGAATCTCGAATTTACTTCTGTCcaaaatcatcttcactcaaacacaactgcTCCATGATAATGATACAGGATAATATGTTCGGGTAAAGTATTAAACTTAAATCATTGTAAAGAGCAATACTTGTG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU82328 True 391 lncRNA 0.45 2 833987 835273

Neighbor

gene id symbol gene type direction distance location
LOC111192892 NA coding upstream 23990 809234 ~ 809997 (+)
syt10 syt10,LOC107744086,LOC107656242,LOC107565666,LOC107592193,LOC107658793 coding upstream 53190 749881 ~ 780797 (+)
LOC103021355 LOC103021355,LOC108426405,LOC108279735,LOC107757248,LOC107694301,LOC100694258,LOC107590616 coding upstream 212245 614113 ~ 621742 (+)
LOC107197032 NA coding upstream 243882 586693 ~ 590105 (+)
LOC103022716 NA coding upstream 259486 570221 ~ 574501 (+)
LOC111192924 NA coding downstream 5764 841037 ~ 844690 (+)
LOC111192895 NA coding downstream 58096 893369 ~ 912312 (+)
LOC111192896 NA coding downstream 77618 912891 ~ 914305 (+)
LOC111192897 NA coding downstream 83901 919174 ~ 927544 (+)
LOC111192898 NA coding downstream 94337 929610 ~ 943921 (+)
G61011 NA non-coding upstream 33117 800649 ~ 800870 (+)
G60996 NA non-coding upstream 93089 740691 ~ 740898 (+)
G60983 NA non-coding upstream 210552 616774 ~ 623435 (+)
G60910 NA non-coding upstream 363298 455836 ~ 470689 (+)
G60903 NA non-coding upstream 556665 277010 ~ 277322 (+)
G61023 NA non-coding downstream 6322 841595 ~ 949084 (+)
LOC103039262 NA non-coding downstream 10360 845633 ~ 952485 (+)
LOC111192928 NA non-coding downstream 18438 853711 ~ 858509 (+)
LOC111192927 NA non-coding downstream 79627 914900 ~ 916812 (+)
LOC111192923 NA non-coding downstream 212524 1047797 ~ 1049056 (+)
LOC103045537 NA other upstream 208978 599659 ~ 625009 (+)
LOC103023024 cry1,LOC103023024,LOC108426403,LOC108279922,LOC105900698,LOC107560722 other upstream 275407 539518 ~ 558580 (+)
mrps33 mrps33,LOC106591474,LOC107694294,LOC107725593 other upstream 687213 144189 ~ 146774 (+)
G61013 LOC108444125,LOC108444119,LOC108412201,LOC108262118 other downstream 18253 853526 ~ 1043316 (+)
LOC103024246 tspan11,LOC108279944,LOC107593980,LOC106576552,LOC107720401,LOC107560736,LOC107694254 other downstream 610362 1445635 ~ 1481418 (+)
LOC103031096 pclo,pcloa,LOC107655554,LOC107577557 other downstream 879544 1714817 ~ 1808930 (+)
LOC103036328 tmem178b,LOC107725619,LOC107694293,LOC107590312,LOC107655551 other downstream 1086122 1921395 ~ 1935499 (+)
G61575 NA other downstream 2461273 3296546 ~ 3303998 (+)

Expression


Co-expression Network