G61085


Basic Information

Item Value
gene id G61085
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035903.1
NCBI id CM008306.1
chromosome length 40813162
location 1505343 ~ 1505817 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU82430
aaaatccgatttttcttgttttttttgtggaatacagtaggtctctccgagttgaatgtgtacacctgcacattaaactgttttgcagcccccattgtctgcaggagctaagcaaagaaatcccccctccccccctccgaaaaacgggtgaattttgaattatctttctgcctacgtaggcagaaactcacagaccagcccaccttggctcgagaaactcccagaggcggagctgaagcgacgcaacatcaccgctcatcagttaggaggtgggaggcagtgagcggcagagcggtggaggggcgtcgcagtgctcctagccaatcagaggagagatatttgcatgctgtttgcatgtatgaatattcatgagcaaagctggaatccggtcattttggacacacccctaaaacagtccattaaaaaagagctatacagagacacctgagcactttttttttacaaaaacggctca

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU82430 True 475 lncRNA 0.48 1 1505343 1505817

Neighbor

gene id symbol gene type direction distance location
cracr2a NA coding upstream 100844 1397198 ~ 1404499 (+)
LOC111192900 NA coding upstream 497516 1000887 ~ 1007827 (+)
LOC111192898 NA coding upstream 561422 929610 ~ 943921 (+)
LOC111192897 NA coding upstream 577799 919174 ~ 927544 (+)
LOC111192896 NA coding upstream 591038 912891 ~ 914305 (+)
LOC103023715 LOC103023715,LOC108436009,LOC108280003,LOC107562295,LOC107560735,LOC107757236,LOC107694310 coding downstream 125056 1630873 ~ 1693966 (+)
ankrd16 ankrd16 coding downstream 306383 1812200 ~ 1825435 (+)
trnay-gua_2 NA coding downstream 306954 1812771 ~ 1812858 (+)
LOC103022887 gdi2,LOC108436005,LOC108279819,LOC107754057 coding downstream 321023 1826840 ~ 1841427 (+)
LOC103022369 LOC103022369,LOC108436003 coding downstream 336461 1842278 ~ 1845762 (+)
LOC111192863 NA non-coding upstream 454253 1050130 ~ 1051090 (+)
LOC111192923 NA non-coding upstream 456287 1047797 ~ 1049056 (+)
LOC103039262 NA non-coding upstream 552858 845633 ~ 952485 (+)
G61023 NA non-coding upstream 556259 841595 ~ 949084 (+)
G61100 NA non-coding downstream 103308 1609125 ~ 1621557 (+)
G61131 NA non-coding downstream 253021 1758838 ~ 1761182 (+)
G61132 NA non-coding downstream 283718 1789535 ~ 1790432 (+)
trnay-gua_3 NA non-coding downstream 310198 1816015 ~ 1816102 (+)
trnay-gua_4 NA non-coding downstream 310586 1816403 ~ 1816490 (+)
LOC103024246 tspan11,LOC108279944,LOC107593980,LOC106576552,LOC107720401,LOC107560736,LOC107694254 other upstream 23925 1445635 ~ 1481418 (+)
G61014 NA other upstream 456287 806565 ~ 1049056 (+)
G61013 LOC108444125,LOC108444119,LOC108412201,LOC108262118 other upstream 462027 853526 ~ 1043316 (+)
LOC103045537 NA other upstream 880334 599659 ~ 625009 (+)
LOC103023024 cry1,LOC103023024,LOC108426403,LOC108279922,LOC105900698,LOC107560722 other upstream 946763 539518 ~ 558580 (+)
LOC103031096 pclo,pcloa,LOC107655554,LOC107577557 other downstream 209000 1714817 ~ 1808930 (+)
LOC103036328 tmem178b,LOC107725619,LOC107694293,LOC107590312,LOC107655551 other downstream 415578 1921395 ~ 1935499 (+)
G61575 NA other downstream 1790729 3296546 ~ 3303998 (+)
LOC111192936 NA other downstream 4234738 5740555 ~ 5765785 (+)
plxnb2 NA other downstream 4276274 5782091 ~ 5967735 (+)

Expression


Co-expression Network