G61425


Basic Information

Item Value
gene id G61425
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035903.1
NCBI id CM008306.1
chromosome length 40813162
location 2655787 ~ 2657475 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU82913
ttctttctaataaagacttaaaaatcagtgtttcagaaaatgtgATTATTATATGAGACCAATTGGAACTTTTtaagtgtgtgcagtgtgccaagtcctgctggaaaatgaaatccgcatctccataaatgttgtcagcagagggaagcatgaagtgctgtaagactttagacttgataaaacacagtggatcaacagcagctgatgacatgtctctccaaaccatcactgattgtgtgattgaaacttcacactagacctcgagcagtttggactgtgtgtctcttccaCTCTACCAATCTGAATTAATGCATGTGCCCATAACAGCACCATCACTGTATGACCTTTAATAAATACAACCTCTATTGTTTAACAGGCAAAGtaacaacaaacagaataatATATTCCCACATGATTTCTTTTTTGATGTTGTTATCGTCCCTTATTTTACAGATCCTCACAATTCATTGACCTGCAAAACCTTGGAATAAAATTTTGAATGTAAACCGTTTCTTATTTCtgcatttgaataaagttgccAAAAATATGCTATTTGCTATTTTGTACTgattaaatataacatttttatattataaaggaATGTCTGTATCAGAGGTAAGGATATTTCAGTCCTGAGTCCACGGTCAGCTGCTCATCCTCTGGGCTCTGAGGGTTTGAAATGTCTCTCAGTAAGTCAGGAGAGCGGTGAAGTTCCTTCTTCAGAAATCCAGGAATCTCCAGTCTGTCgatatctgtctctctcaccaGCTTTCTTATCAGTTTTAAACAGTATTCCTGTAAAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU82913 True 803 lncRNA 0.37 2 2655787 2657475

Neighbor

gene id symbol gene type direction distance location
lemd3 lemd3,LOC106576661 coding downstream 42973 2600412 ~ 2612814 (-)
msrb3 msrb3,LOC107725596,LOC107757268,LOC107587134 coding downstream 58120 2574909 ~ 2597667 (-)
LOC103031987 NA coding downstream 183724 2466202 ~ 2472063 (-)
irak3 NA coding downstream 203885 2438077 ~ 2451902 (-)
helb NA coding downstream 218626 2426438 ~ 2437161 (-)
tmbim4 tmbim4,LOC107587136,LOC107655596,LOC107567270,LOC107757272,LOC107694279 coding upstream 4328 2661803 ~ 2668498 (-)
grip1 grip1 coding upstream 15698 2673173 ~ 3025867 (-)
LOC103044476 NA coding upstream 809727 3467202 ~ 3471553 (-)
rint1 rint1,LOC107725664,LOC107733011,LOC107553890,LOC107664862,LOC107695894,LOC107590313 coding upstream 1037712 3695187 ~ 3703230 (-)
LOC103030485 NA coding upstream 1176857 3834332 ~ 3838502 (-)
G61361 NA non-coding downstream 82278 2572697 ~ 2573509 (-)
G61359 NA non-coding downstream 119854 2535723 ~ 2535933 (-)
LOC111192931 NA non-coding downstream 569912 2071373 ~ 2085875 (-)
G61265 NA non-coding downstream 598455 2057120 ~ 2057332 (-)
G61261 NA non-coding downstream 614481 2041028 ~ 2041306 (-)
G61427 NA non-coding upstream 25201 2682676 ~ 2683840 (-)
G61429 NA non-coding upstream 49317 2706792 ~ 2710406 (-)
G61559 NA non-coding upstream 587381 3244856 ~ 3245152 (-)
G61561 NA non-coding upstream 609163 3266638 ~ 3267010 (-)
G61595 NA non-coding upstream 685217 3342692 ~ 3342998 (-)
LOC103031776 NA other downstream 121434 2464834 ~ 2534353 (-)
LOC103032312 LOC103032312,LOC108426389 other downstream 197661 2454547 ~ 2458126 (-)
G61251 mkrn1 other downstream 661929 1984478 ~ 1993858 (-)
G61587 NA other upstream 656678 3314153 ~ 3315239 (-)
mdm1 NA other upstream 872045 3529520 ~ 3548702 (-)
G61676 NA other upstream 993370 3650845 ~ 3658268 (-)
cdpf1 cdpf1,LOC107695897 other upstream 1183126 3840601 ~ 3846469 (-)
LOC103039416 cald1a,LOC108425386,LOC107656362,LOC107725991,LOC107658884,LOC107710121 other upstream 1677643 4335118 ~ 4426156 (-)

Expression


Co-expression Network