G61575


Basic Information

Item Value
gene id G61575
gene name NA
gene type unknown
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035903.1
NCBI id CM008306.1
chromosome length 40813162
location 3296546 ~ 3303998 (+)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU83069
cagaaactgaagtggtctcttaattttttccagagctttatatgtatattcttTGCACATGCTTTAAATTAATGCGACAAAATACCTGTCTATATGCTAATGCACTCCCATACTAATACAGTCCTAGAAATCATCTTGGCAATGGTAATAGAGAAATTTGTGCTGAAGAAAATCCtcatttgtaattaaaatcattaatttataggatttggactttttttattgattaaagaAATTGGTTTAAGAATTGCTCGTCATcttttttcagctctttccCATCTTAAGGTAATATAAGGAGAAGAAAATGGGTGTCCCAGATAAACACACTACTATGGATGTGAATGAAGACTGGCCAGCTGGACTACGTTTCCGAAAGATACGCCATCGAAGAATGAGAAGAAGTCAATCACCATCCCGTGAGGTTTCTCCAGTACCATCCTACTACTCTGAACCGATTTCAGTCCGACAGCGCAATGATGTGACTCTCAGACTCCCCCCACTTCTCAGATGGGCTCAtcaggaggaagaggatgacTCTGAGGACACTCAGAGTCTAAAGAGCCTGCCCACTGTGATGAGCACATTAGTTTTTGACCCTAAGGTCAAAAGGTCACACCACCTCTCCAAGGAACAAGTCATCTCTGGCCTCAACCTGCCTCCTCTGGTCACTTCCAAGTAATAAATTAACTTACAAGGCGAGATAGGTCAAAGTTGCTCCTGATGTGCTATGAGTCTAAATATGTCTCcaaaaatgcttttatatttCACATTAGAAATTATTACCTTCACACGATGGAAATACTAAATATACAGCACCCTCTATaagtattggcacccctggttaagaagtGTTTATTGGCTCCTAATAAATTATAATCTTTTTGATAATATaggacaaaaatgcaaaaaaagagaaaaggtaaGCTTTAATTCAAGTGCCTTTATttggtggggaaaaaaaaaatcacactttaggaaataaatattttatttatttcctaaataaataaacaccccTGGTGTTAATCATATCCTTAATCCTAATCCTTAAAACCTATATCTCTTCACGAGATGGGCAAATTCACAGTACAGAAGACAATCTATGTCATTAGCATAGGTTAAGTGTTATACATAGGTCGTGTTTCTAATACCATTTCTCATCTTAGATGTACTCTGGTGGTAAAAGGCACTGGATGTTCCAAACCCCGGGGTTTCCTACCAGTGATCAAatccaaaagtttggacaggcCTCCATGCCGGGCTGGATGCAGGCCAGATAAACTAAAAGCATCCGTAGGTCAAAGCTGCCAAATGCTGCCCTCAACCATAGCTGTCTCTGAGGAACCCCCTGGACCCCGCATCACCTTCCACAGCCCAGTCGTAAATGCTGAGTATTCTGTCACTCCCGATATAACAAAAGAGACCTGGCAAACCTTCAGAACTCACCAATCACGGAGACCTGTGATGAAAAAAGCCCAAGTGACCAACAGACAAGGTTTTAAATTCTTGTTGGAAGAGAGATACTTTCCCTGTCCAAGAGAACCACACCTGCTGGAACCACTATCTGGTTTTCAGGAGCACCTGCGACACCAGCTTGTTAACTCCCCCCTACCCCACCCAACACTACTGCCAGTCCAGCCCATCTCCTGATTAACCAGAGAGACTACCCACACCATGGTCTGCATTGGTCTAGAATGGAGCGCACTGTGGAGCTTTGCAACTCGCAAGAAAAGCGACTTCCCAGAATTACCATGACCTGCCCAACACCATCTCCCAAACACCTGCAGCACCCAGGAAAGAGGCACGTGGCTTGAGTACTTAAAGGAATTGTTTGGCCAAAAACTGcttttatatcattttacaaactcaataatttttgttttgatagatccaaaatatctaagatgagttcagtgtgtttatgtaaaGTGTGCACTGGAACTACAAgtctaatgtagctaacaagtacaTGAAACATgggactagtattgtgtcccatgagtTTTGCCACCTCCTATGGAAGCTAAAATATGCTCCACTGACCTGAGTGGTTTGCATGTGAGGCCTACCGCATTGAacatggatgtgatttctgccgaGTCGCATAGCGTTCCCAAGGACAATTCAACTGCTGGacatgatcattaccactcattgcactgtccactgtgggtggtaattcaagctgaactgcttgaatttttgcaccaggtgtggcataaagttattcaaaagcagtgtgtaaggctggtggaggagaacatgatgtcaagatgcataaaaactgtgattgaaaaccaga
>TU83070
ATTTTGCGTAATTGTGGTAGGTTTGAGCTTAATTGACCCTAGACAAAACAAGATAATGTAAAGGGGTGGTAAGTCAAACTGTAGCCATGTGCTAATGAAAAATTATTAGAAATAGTTATGCTTTATGTGTATTAAGTGCTGAAGTAAAGGTGATCAAAGGTAgtttgtagaaaataaatgtgtaggagaagaaccacttttcttTGCACTCATTCACCTTTGCTTTTCTTCTTCTAAAACACAAGGACAACCAACTAATGCTCTAAAACAGCATTTTCTCAAGTCAATTGTAATGTGGCACTTTATCACCAATACTCAgatctttacacacacacaatataccaCATTATGAAAGGATcgcctttttaaaaaaatcactttcagGATATTAGCATTGGTGTTACTTGGTATTGAAAGTGTTTTTTGCCAAATAATGCTGTAGGCACGATTAATTTATCCACAGCTCTGCGTGGGGTCTTGCCGGAGGATGACCCACCAATCAGGAGCTAGACACTTTGTTGGCTCCTGCTAGCATTGGTCTGACTGGGTGGTCAGGGTAATGTCCACACTTTAACCACCAACTACATTCCTCCTTGTGAAGAGGAAGTCCGTCGGCAGTTCAGGGACCAGGTATGCTTTACAGGCTTCTTGTTGGGATTAGATTGCGTGCATTATTCAGCCTGTAGCACGCGGCACAGACATCATTCTGCAGTCTCTCTCTGTTGAGAGAACAGCCTCTCGGAGCTATGctctttccCATCTTAAGGTAATATAAGGAGAAGAAAATGGGTGTCCCAGATAAACACACTACTATGGATGTGAATGAAGACTGGCCAGCTGGACTACGTTTCCGAAAGATACGCCATCGAAGAATGAGAAGAAGTCAATCACCATCCCGTGAGGTTTCTCCAGTACCATCCTACTACTCTGAACCGATTTCAGTCCGACAGCGCAATGATGTGACTCTCAGACTCCCCCCACTTCTCAGATGGGCTCAtcaggaggaagaggatgacTCTGAGGACACTCAGAGTCTAAAGAGCCTGCCCACTGTGATGAGCACATTAGTTTTTGACCCTAAGGTCAAAAGGTCACACCACCTCTCCAAGGAACAAGTCATCTCTGGCCTCAACCTGCCTCCTCTGGTCACTTCCAAGTAATAAATTAACTTACAAGGCGAGATAGGTCAAAGTTGCTCCTGATGTGCTATGAGTCTAAATATGTCTCcaaaaatgcttttatatttCACATTAGAAATTATTACCTTCACACGATGGAAATACTAAATATACAGCACCCTCTATaagtattggcacccctggttaagaagtGTTTATTGGCTCCTAATAAATTATAATCTTTTTGATAATATaggacaaaaatgcaaaaaaagagaaaaggtaaGCTTTAATTCAAGTGCCTTTATttggtggggaaaaaaaaaatcacactttaggaaataaatattttatttatttcctaaataaataaacaccccTGGTGTTAATCATATCCTTAATCCTAATCCTTAAAACCTATATCTCTTCACGAGATGGGCAAATTCACAGTACAGAAGACAATCTATGTCATTAGCATAGGTTAAGTGTTATACATAGGTCGTGTTTCTAATACCATTTCTCATCTTAGATGTACTCTGGTGGTAAAAGGCACTGGATGTTCCAAACCCCGGGGTTTCCTACCAGTGATCAAatccaaaagtttggacaggcCTCCATGCCGGGCTGGATGCAGGCCAGATAAACTAAAAGCATCCGTAGGTCAAAGCTGCCAAATGCTGCCCTCAACCATAGCTGTCTCTGAGGAACCCCCTGGACCCCGCATCACCTTCCACAGCCCAGTCGTAAATGCTGAGTATTCTGTCACTCCCGATATAACAAAAGAGACCTGGCAAACCTTCAGAACTCACCAATCACGGAGACCTGTGATGAAAAAAGCCCAAGTGACCAACAGACAAGGTTTTAAATTCTTGTTGGAAGAGAGATACTTTCCCTGTCCAAGAGAACCACACCTGCTGGAACCACTATCTGGTTTTCAGGAGCACCTGCGACACCAGCTTGTTAACTCCCCCCTACCCCACCCAACACTACTGCCAGTCCAGCCCATCTCCTGATTAACCAGAGAGACTACCCACACCATGGTCTGCATTGGTCTAGAATGGAGCGCACTGTGGAGCTTTGCAACTCGCAAGAAAAGCGACTTCCCAGAATTACCATGACCTGCCCAACACCATCTCCCAAACACCTGCAGCACCCAGGAAAGAGGCACGTGGCTTGAGTACTTAAAGGAATTGTTTGGCCAAAAACTGcttttatatcattttacaaactcaataatttttgttttgatagatccaaaatatctaagatgagttcagtgtgtttatgtaaaGTGTGCACTGGAACTACAAgtctaatgtagctaacaagtacaTGAAACATgggactagtattgtgtcccatgagtTTTGCCACCTCCTATGGAAGCTAAAATATGCTCCACTGACCTGAGTGGTTTGCATGTGAGGCCTACCGCATTGAacatggatgtgatttctgccgaGTCGCATAGCGTTCCCAAGGACAATTCAACTGCTGGacatgatcattaccactcattgcactgtccactgtgggtggtaattcaagctgaactgcttgaatttttgcaccaggtgtggcataaagttattcaaaagcagtgtgtaaggctggtggaggagaacatgatgtcaagatgcataaaaactgtgattgaaaaccaga

Function

GO:

id name namespace
GO:0022857 transmembrane transporter activity molecular_function
GO:0005215 transporter activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU83069 False 2302 TUCP 0.41 4 3299089 3303998
TU83070 True 2783 TUCP 0.42 6 3296546 3303998

Neighbor

gene id symbol gene type direction distance location
cand1 cand1,LOC107694273,LOC107571724,LOC107587138,LOC107655592 coding upstream 3953 3267964 ~ 3292593 (+)
LOC103029880 NA coding upstream 639052 2653605 ~ 2657494 (+)
wif1 wif1,LOC107757271,LOC107594874,LOC107725640 coding upstream 654442 2614208 ~ 2642104 (+)
lmo3 lmo3,LOC107757261,LOC107550907 coding upstream 972286 2274367 ~ 2324260 (+)
tmem121b cecr6 coding upstream 1291300 2003842 ~ 2005246 (+)
dyrk2 dyrk2,LOC107694272,LOC107757277,LOC107655591 coding downstream 38721 3342719 ~ 3373751 (+)
rap1b rap1b,LOC106576640,LOC107695907 coding downstream 258747 3562745 ~ 3642423 (+)
mcat mcat,LOC107553884,LOC107732994 coding downstream 341319 3645317 ~ 3651651 (+)
cfap54 NA coding downstream 352164 3656162 ~ 3694924 (+)
LOC103031106 LOC108438797 coding downstream 543045 3847043 ~ 3853727 (+)
G61560 NA non-coding upstream 29659 3266308 ~ 3266887 (+)
G61558 NA non-coding upstream 51417 3244857 ~ 3245129 (+)
G61401 NA non-coding upstream 345452 2950681 ~ 2951094 (+)
G61397 NA non-coding upstream 365138 2851175 ~ 2931408 (+)
G61370 NA non-coding upstream 638407 2657918 ~ 2658139 (+)
G61607 NA non-coding downstream 90518 3394516 ~ 3397772 (+)
G61608 NA non-coding downstream 90781 3394779 ~ 3396035 (+)
G61657 rint1 non-coding downstream 391236 3695234 ~ 3697781 (+)
LOC111192864 NA non-coding downstream 408244 3712242 ~ 3713423 (+)
LOC111192865 NA non-coding downstream 409559 3713557 ~ 3714248 (+)
LOC103036328 tmem178b,LOC107725619,LOC107694293,LOC107590312,LOC107655551 other upstream 1361047 1921395 ~ 1935499 (+)
LOC103031096 pclo,pcloa,LOC107655554,LOC107577557 other upstream 1487616 1714817 ~ 1808930 (+)
LOC103024246 tspan11,LOC108279944,LOC107593980,LOC106576552,LOC107720401,LOC107560736,LOC107694254 other upstream 1815128 1445635 ~ 1481418 (+)
G61014 NA other upstream 2247490 806565 ~ 1049056 (+)
G61013 LOC108444125,LOC108444119,LOC108412201,LOC108262118 other upstream 2253230 853526 ~ 1043316 (+)
LOC111192936 NA other downstream 2436557 5740555 ~ 5765785 (+)
plxnb2 NA other downstream 2478093 5782091 ~ 5967735 (+)
c7h12orf75 NA other downstream 2678238 5982236 ~ 5993994 (+)
G62455 gpr85,LOC106576049,LOC107580073 other downstream 3547232 6851230 ~ 6855762 (+)
rab19 rab19,LOC108425368,LOC106523538 other downstream 5097842 8401840 ~ 8415039 (+)

Expression


Co-expression Network