G61606


Basic Information

Item Value
gene id G61606
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035903.1
NCBI id CM008306.1
chromosome length 40813162
location 3388633 ~ 3388871 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU83112
GTGTGATTTAACAGGGAGTACAGTCAGCTCATTAGTTGtgtacagagactgtaaaaaagatggacgccgtgtcgccgttcccatttattcagtgaaaatgaagccaaaatcttccgccatgttggcgaccctgaaacccgagtctgcgcagtagagaccagaggagagagaaagactgtggagagacagcctactcatttaaataaccccgcccctgagggctgccgcagggtcacagg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU83112 True 239 lncRNA 0.51 1 3388633 3388871

Neighbor

gene id symbol gene type direction distance location
grip1 grip1 coding downstream 362766 2673173 ~ 3025867 (-)
tmbim4 tmbim4,LOC107587136,LOC107655596,LOC107567270,LOC107757272,LOC107694279 coding downstream 720135 2661803 ~ 2668498 (-)
lemd3 lemd3,LOC106576661 coding downstream 775819 2600412 ~ 2612814 (-)
msrb3 msrb3,LOC107725596,LOC107757268,LOC107587134 coding downstream 790966 2574909 ~ 2597667 (-)
LOC103031987 NA coding downstream 916570 2466202 ~ 2472063 (-)
LOC103044476 NA coding upstream 78331 3467202 ~ 3471553 (-)
rint1 rint1,LOC107725664,LOC107733011,LOC107553890,LOC107664862,LOC107695894,LOC107590313 coding upstream 306316 3695187 ~ 3703230 (-)
LOC103030485 NA coding upstream 445461 3834332 ~ 3838502 (-)
LOC103036484 NA coding upstream 466671 3855542 ~ 3865736 (-)
LOC103036181 LOC108438810,LOC108279896 coding upstream 479867 3868738 ~ 3889640 (-)
G61595 NA non-coding downstream 45635 3342692 ~ 3342998 (-)
G61561 NA non-coding downstream 121623 3266638 ~ 3267010 (-)
G61559 NA non-coding downstream 143481 3244856 ~ 3245152 (-)
G61429 NA non-coding downstream 678227 2706792 ~ 2710406 (-)
G61427 NA non-coding downstream 704793 2682676 ~ 2683840 (-)
G61609 NA non-coding upstream 5907 3394778 ~ 3395857 (-)
G61610 NA non-coding upstream 7849 3396720 ~ 3397772 (-)
G61611 NA non-coding upstream 9687 3398558 ~ 3398770 (-)
G61630 NA non-coding upstream 123330 3512201 ~ 3515815 (-)
G61670 rap1b,LOC106576640,LOC107695907 non-coding upstream 173900 3562771 ~ 3642517 (-)
G61587 NA other downstream 73394 3314153 ~ 3315239 (-)
LOC103031776 NA other downstream 854280 2464834 ~ 2534353 (-)
LOC103032312 LOC103032312,LOC108426389 other downstream 930507 2454547 ~ 2458126 (-)
G61251 mkrn1 other downstream 1394775 1984478 ~ 1993858 (-)
mdm1 NA other upstream 140649 3529520 ~ 3548702 (-)
G61676 NA other upstream 261974 3650845 ~ 3658268 (-)
cdpf1 cdpf1,LOC107695897 other upstream 451730 3840601 ~ 3846469 (-)
LOC103039416 cald1a,LOC108425386,LOC107656362,LOC107725991,LOC107658884,LOC107710121 other upstream 946247 4335118 ~ 4426156 (-)
G61942 NA other upstream 1233342 4622213 ~ 4622577 (-)

Expression


Co-expression Network