G61609


Basic Information

Item Value
gene id G61609
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035903.1
NCBI id CM008306.1
chromosome length 40813162
location 3394778 ~ 3395857 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU83126
aagagagagtgagaagtagagaagtagagagcaaaagagagagcgagaagtagataagtagagagcaaaagagagagtgagaaacagagaagtagagagcaaaagagagagtgaaaagtagagagagagtgagaaagagagagtgagagaagtagagagagagtgagaaagagagagtgagagaagtagagagagagtgagaaagagagagtggttgctaagcagttactaggtggttgctaagt
>TU83127
gagaagtagagagagagtgagaaatagagacgtagagagagtgagaaatagagaatgagaaatagagaagtagagagcaaaagagagagtgagaagtagagagcaaaagagagagcgagaagtagataagtagagagcaaaagagagagtgagaaacagagaagtagagagcaaaagagagagtgaaaagtagagagagagtgagaaagagagagtgagagaagtagagagagagtgagaaagagagagtgagagaagtagagagagagtgagaaagagagagtggttgctaagcagttactaggtggttgctaagt
>TU83128
agagtgagaaagagagtgagaaatagagaagtagagagcaaaagagagtgagaaatagagaagtagagagagtgagaaagagagagtgagaaataaagaaatgtaaagagcaaaagagagagtgagaaatagagaagtagagagaaaaagagagagtgagaaatagagacgtagagagagtgagaaataaagaagtagagagcaaaagagagtgagaaatagagacagagtgagaaagagagaaagagagagtgagaaatagagaagtagagagcaaaagagagagtgagaagtagagagcaaaagagagagcgagaagtagataagtagagagcaaaagagagagtgagaaacagagaagtagagagcaaaagagagagtgaaaagtagagagagagtgagaaagagagagtgagagaagtagagagagagtgagaaagagagagtgagagaagtagagagagagtgagaaagagagagtggttgctaagcagttactaggtggttgctaagt
>TU83129
agagtgagaaagagagtgagaaatagagaagtagagagcaaaagagagtgagaaatagagaagtagagagagtgagaaagagagagtgagaaataaagaaatgtaaagagcaaaagagagagtgagaaatagagaagtagagagagtgagaaagagagtgtgagaaatagagacgtagagagagagtgagaaagaaagagtgagaaatagagaagtagagagcaaaagagagtgagaaatagagaagtagagagcaaaagagagtgagaatagagacatagagagagagtgagaaagagagaaagagagagtgagaaatagagaagtagagagcaaaagagagagtgagaagtagagagcaaaagagagagcgagaagtagataagtagagagcaaaagagagagtgagaaacagagaagtagagagcaaaagagagagtgaaaagtagagagagagtgagaaagagagagtgagagaagtagagagagagtgagaaagagagagtgagagaagtagagagagagtgagaaagagagagtggttgctaagcagttactaggtggttgctaagt

Function

NR:

description
PREDICTED: occludin-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU83126 False 245 lncRNA 0.42 2 3394778 3395857
TU83127 False 317 lncRNA 0.42 2 3394778 3395301
TU83128 False 514 lncRNA 0.40 2 3394778 3395707
TU83129 True 573 lncRNA 0.40 2 3394778 3395707

Neighbor

gene id symbol gene type direction distance location
grip1 grip1 coding downstream 368911 2673173 ~ 3025867 (-)
tmbim4 tmbim4,LOC107587136,LOC107655596,LOC107567270,LOC107757272,LOC107694279 coding downstream 726280 2661803 ~ 2668498 (-)
lemd3 lemd3,LOC106576661 coding downstream 781964 2600412 ~ 2612814 (-)
msrb3 msrb3,LOC107725596,LOC107757268,LOC107587134 coding downstream 797111 2574909 ~ 2597667 (-)
LOC103031987 NA coding downstream 922715 2466202 ~ 2472063 (-)
LOC103044476 NA coding upstream 71345 3467202 ~ 3471553 (-)
rint1 rint1,LOC107725664,LOC107733011,LOC107553890,LOC107664862,LOC107695894,LOC107590313 coding upstream 299330 3695187 ~ 3703230 (-)
LOC103030485 NA coding upstream 438475 3834332 ~ 3838502 (-)
LOC103036484 NA coding upstream 459685 3855542 ~ 3865736 (-)
LOC103036181 LOC108438810,LOC108279896 coding upstream 472881 3868738 ~ 3889640 (-)
G61606 NA non-coding downstream 5907 3388633 ~ 3388871 (-)
G61595 NA non-coding downstream 51780 3342692 ~ 3342998 (-)
G61561 NA non-coding downstream 127768 3266638 ~ 3267010 (-)
G61559 NA non-coding downstream 149626 3244856 ~ 3245152 (-)
G61429 NA non-coding downstream 684372 2706792 ~ 2710406 (-)
G61610 NA non-coding upstream 863 3396720 ~ 3397772 (-)
G61611 NA non-coding upstream 2701 3398558 ~ 3398770 (-)
G61630 NA non-coding upstream 116344 3512201 ~ 3515815 (-)
G61670 rap1b,LOC106576640,LOC107695907 non-coding upstream 166914 3562771 ~ 3642517 (-)
G61746 NA non-coding upstream 392245 3788102 ~ 3854961 (-)
G61587 NA other downstream 79539 3314153 ~ 3315239 (-)
LOC103031776 NA other downstream 860425 2464834 ~ 2534353 (-)
LOC103032312 LOC103032312,LOC108426389 other downstream 936652 2454547 ~ 2458126 (-)
G61251 mkrn1 other downstream 1400920 1984478 ~ 1993858 (-)
mdm1 NA other upstream 133663 3529520 ~ 3548702 (-)
G61676 NA other upstream 254988 3650845 ~ 3658268 (-)
cdpf1 cdpf1,LOC107695897 other upstream 444744 3840601 ~ 3846469 (-)
LOC103039416 cald1a,LOC108425386,LOC107656362,LOC107725991,LOC107658884,LOC107710121 other upstream 939261 4335118 ~ 4426156 (-)
G61942 NA other upstream 1226356 4622213 ~ 4622577 (-)

Expression


Co-expression Network