G61610


Basic Information

Item Value
gene id G61610
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035903.1
NCBI id CM008306.1
chromosome length 40813162
location 3396720 ~ 3397772 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU83133
gttgctaagtggttgctaaggtgttgatatggtatccgggttggttgctaaggtgttgctaggtggttgctaaggtgttgctatggtatccagggtggttggtaaggtgttgctaggtggttgctaaggtgttgctatggtatccggggtgttgccaaggtgttgctaggtggttgctagggtgttgctaggcggttgctatggtatccggggtggttgcta

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU83133 True 222 lncRNA 0.51 3 3396720 3397772

Neighbor

gene id symbol gene type direction distance location
grip1 grip1 coding downstream 370853 2673173 ~ 3025867 (-)
tmbim4 tmbim4,LOC107587136,LOC107655596,LOC107567270,LOC107757272,LOC107694279 coding downstream 728222 2661803 ~ 2668498 (-)
lemd3 lemd3,LOC106576661 coding downstream 783906 2600412 ~ 2612814 (-)
msrb3 msrb3,LOC107725596,LOC107757268,LOC107587134 coding downstream 799053 2574909 ~ 2597667 (-)
LOC103031987 NA coding downstream 924657 2466202 ~ 2472063 (-)
LOC103044476 NA coding upstream 69430 3467202 ~ 3471553 (-)
rint1 rint1,LOC107725664,LOC107733011,LOC107553890,LOC107664862,LOC107695894,LOC107590313 coding upstream 297415 3695187 ~ 3703230 (-)
LOC103030485 NA coding upstream 436560 3834332 ~ 3838502 (-)
LOC103036484 NA coding upstream 457770 3855542 ~ 3865736 (-)
LOC103036181 LOC108438810,LOC108279896 coding upstream 470966 3868738 ~ 3889640 (-)
G61609 NA non-coding downstream 863 3394778 ~ 3395857 (-)
G61606 NA non-coding downstream 7849 3388633 ~ 3388871 (-)
G61595 NA non-coding downstream 53722 3342692 ~ 3342998 (-)
G61561 NA non-coding downstream 129710 3266638 ~ 3267010 (-)
G61559 NA non-coding downstream 151568 3244856 ~ 3245152 (-)
G61611 NA non-coding upstream 786 3398558 ~ 3398770 (-)
G61630 NA non-coding upstream 114429 3512201 ~ 3515815 (-)
G61670 rap1b,LOC106576640,LOC107695907 non-coding upstream 164999 3562771 ~ 3642517 (-)
G61746 NA non-coding upstream 390330 3788102 ~ 3854961 (-)
G61754 NA non-coding upstream 449256 3847028 ~ 3851116 (-)
G61587 NA other downstream 81481 3314153 ~ 3315239 (-)
LOC103031776 NA other downstream 862367 2464834 ~ 2534353 (-)
LOC103032312 LOC103032312,LOC108426389 other downstream 938594 2454547 ~ 2458126 (-)
G61251 mkrn1 other downstream 1402862 1984478 ~ 1993858 (-)
mdm1 NA other upstream 131748 3529520 ~ 3548702 (-)
G61676 NA other upstream 253073 3650845 ~ 3658268 (-)
cdpf1 cdpf1,LOC107695897 other upstream 442829 3840601 ~ 3846469 (-)
LOC103039416 cald1a,LOC108425386,LOC107656362,LOC107725991,LOC107658884,LOC107710121 other upstream 937346 4335118 ~ 4426156 (-)
G61942 NA other upstream 1224441 4622213 ~ 4622577 (-)

Expression


Co-expression Network