G61746


Basic Information

Item Value
gene id G61746
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035903.1
NCBI id CM008306.1
chromosome length 40813162
location 3788102 ~ 3854961 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU83330
tactttttttatcacgttttaatacacccaaagtccatttcacactggagctCTCCATTAAGTTGCACTTACACACTCAAAACATGTCTCGTCCCAGAGGAGAAGCATTCCCAGTACATGAGGACCCTCTGGAGCAGATCTCTGATTTCcacacattttgttttaaatattgaataatCAGGTGTCCCCATACTTTTGgtcatatagtgtatatatggaACATAGAAAAGgcagctgcagcatttaaaaagtgtaaaaagttaCATGTTTTCTTATAacagtttttcattattattcaagTATGATCTGTATGGAACAAAATACTTTCTGTAAATACTCAAACTAAATATGTTAGGGTCTTAAAACACTTTCACAACTTTTAGACGTTATGACTGTATGCACTCTTTCACTTCAAAGCACATCTGTGAAGGTCAGCTCAACTAAACCTGTTTTCATGTTATGCTTCTAATACTCTCTATTTACTGTTTT

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG:

id description
ko04975 Fat digestion and absorption
ko04977 Vitamin digestion and absorption

RNA

RNA id representative length rna type GC content exon number start site end site
TU83330 True 489 lncRNA 0.34 2 3788102 3854961

Neighbor

gene id symbol gene type direction distance location
rint1 rint1,LOC107725664,LOC107733011,LOC107553890,LOC107664862,LOC107695894,LOC107590313 coding downstream 84872 3695187 ~ 3703230 (-)
LOC103044476 NA coding downstream 316549 3467202 ~ 3471553 (-)
grip1 grip1 coding downstream 762235 2673173 ~ 3025867 (-)
tmbim4 tmbim4,LOC107587136,LOC107655596,LOC107567270,LOC107757272,LOC107694279 coding downstream 1119604 2661803 ~ 2668498 (-)
lemd3 lemd3,LOC106576661 coding downstream 1175288 2600412 ~ 2612814 (-)
LOC103036484 NA coding upstream 581 3855542 ~ 3865736 (-)
LOC103036181 LOC108438810,LOC108279896 coding upstream 13777 3868738 ~ 3889640 (-)
LOC103029733 LOC108438795 coding upstream 45240 3900201 ~ 3915629 (-)
LOC103029416 LOC108438794 coding upstream 64056 3919017 ~ 3930603 (-)
wnt7b wnt7b,wnt7ba,LOC103028473,LOC107695867,LOC107725526,LOC107732964 coding upstream 113885 3968846 ~ 3990482 (-)
G61670 rap1b,LOC106576640,LOC107695907 non-coding downstream 145585 3562771 ~ 3642517 (-)
G61630 NA non-coding downstream 272287 3512201 ~ 3515815 (-)
G61611 NA non-coding downstream 389332 3398558 ~ 3398770 (-)
G61610 NA non-coding downstream 390330 3396720 ~ 3397772 (-)
G61609 NA non-coding downstream 392245 3394778 ~ 3395857 (-)
G61760 NA non-coding upstream 81723 3936684 ~ 3937790 (-)
G61785 NA non-coding upstream 154476 4009437 ~ 4009943 (-)
G61818 NA non-coding upstream 155827 4010788 ~ 4013340 (-)
G61833 ppara non-coding upstream 218808 4073769 ~ 4075972 (-)
G61837 NA non-coding upstream 228763 4083724 ~ 4099381 (-)
G61676 NA other downstream 129834 3650845 ~ 3658268 (-)
mdm1 NA other downstream 239400 3529520 ~ 3548702 (-)
G61587 NA other downstream 472863 3314153 ~ 3315239 (-)
LOC103031776 NA other downstream 1253749 2464834 ~ 2534353 (-)
LOC103032312 LOC103032312,LOC108426389 other downstream 1329976 2454547 ~ 2458126 (-)
LOC103039416 cald1a,LOC108425386,LOC107656362,LOC107725991,LOC107658884,LOC107710121 other upstream 480157 4335118 ~ 4426156 (-)
G61942 NA other upstream 767252 4622213 ~ 4622577 (-)
G62377 NA other upstream 2519508 6374469 ~ 6374980 (-)
pphln1 pphln1,LOC108279830 other upstream 2778049 6633010 ~ 6695389 (-)
G62484 NA other upstream 2816649 6671610 ~ 6737948 (-)

Expression


Co-expression Network