G61754


Basic Information

Item Value
gene id G61754
gene name NA
gene type non-coding
species mexican tetra (Astyanax mexicanus)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_035903.1
NCBI id CM008306.1
chromosome length 40813162
location 3847028 ~ 3851116 (-)
genome version Astyanax_mexicanus-2.0_2017_mexican_tetra_Genome

Sequence

>TU83340
ctgcagtgggaacaaaatatgaaaaataaacaacaaaaaaacaagcagacaaAGTTGACACCTTATAATCCCAGTAGAACTGCTGAGGGTACCGCCGCTGGCCTGCAAATGCATCTCCTGCCTTCGCCCCAAACTCAAACCTCTCCTCCTGTTTATAAGCGAAGCTCTCTATCAAGAAATACATTGCATGATTATTAGCTGCAGAAGCAGAAATAAATGGTACAATATGCATAACTTCGGGTTTGGAATTAAAGACTTGACGTACTTCGAGCCTGTTTGGGAAGGAGTTTGATGGGGATCCTCCTTCTGACATCAGGACCTCCTAATGTTCCCTCTGTTCCCTGCATGTCACTGTCTGTAAAGTATCGCAGCTACAGGCAGCCGGAGCCCAGGCAGTGTGGATTTCCCTCCTTACCACTCAGATCCATGTCTGTGTGGGTGAATCCAGAGTCATTGCGCGCTTCCGTTATAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU83340 True 472 lncRNA 0.46 2 3847028 3851116

Neighbor

gene id symbol gene type direction distance location
LOC103030485 NA coding downstream 8526 3834332 ~ 3838502 (-)
rint1 rint1,LOC107725664,LOC107733011,LOC107553890,LOC107664862,LOC107695894,LOC107590313 coding downstream 143798 3695187 ~ 3703230 (-)
LOC103044476 NA coding downstream 375475 3467202 ~ 3471553 (-)
grip1 grip1 coding downstream 821161 2673173 ~ 3025867 (-)
tmbim4 tmbim4,LOC107587136,LOC107655596,LOC107567270,LOC107757272,LOC107694279 coding downstream 1178530 2661803 ~ 2668498 (-)
LOC103036484 NA coding upstream 4426 3855542 ~ 3865736 (-)
LOC103036181 LOC108438810,LOC108279896 coding upstream 17622 3868738 ~ 3889640 (-)
LOC103029733 LOC108438795 coding upstream 49085 3900201 ~ 3915629 (-)
LOC103029416 LOC108438794 coding upstream 67901 3919017 ~ 3930603 (-)
wnt7b wnt7b,wnt7ba,LOC103028473,LOC107695867,LOC107725526,LOC107732964 coding upstream 117730 3968846 ~ 3990482 (-)
G61670 rap1b,LOC106576640,LOC107695907 non-coding downstream 204511 3562771 ~ 3642517 (-)
G61630 NA non-coding downstream 331213 3512201 ~ 3515815 (-)
G61611 NA non-coding downstream 448258 3398558 ~ 3398770 (-)
G61610 NA non-coding downstream 449256 3396720 ~ 3397772 (-)
G61609 NA non-coding downstream 451171 3394778 ~ 3395857 (-)
G61760 NA non-coding upstream 85568 3936684 ~ 3937790 (-)
G61785 NA non-coding upstream 158321 4009437 ~ 4009943 (-)
G61818 NA non-coding upstream 159672 4010788 ~ 4013340 (-)
G61833 ppara non-coding upstream 222653 4073769 ~ 4075972 (-)
G61837 NA non-coding upstream 232608 4083724 ~ 4099381 (-)
cdpf1 cdpf1,LOC107695897 other downstream 559 3840601 ~ 3846469 (-)
G61676 NA other downstream 188760 3650845 ~ 3658268 (-)
mdm1 NA other downstream 298326 3529520 ~ 3548702 (-)
G61587 NA other downstream 531789 3314153 ~ 3315239 (-)
LOC103031776 NA other downstream 1312675 2464834 ~ 2534353 (-)
LOC103039416 cald1a,LOC108425386,LOC107656362,LOC107725991,LOC107658884,LOC107710121 other upstream 484002 4335118 ~ 4426156 (-)
G61942 NA other upstream 771097 4622213 ~ 4622577 (-)
G62377 NA other upstream 2523353 6374469 ~ 6374980 (-)
pphln1 pphln1,LOC108279830 other upstream 2781894 6633010 ~ 6695389 (-)
G62484 NA other upstream 2820494 6671610 ~ 6737948 (-)

Expression


Co-expression Network